PXD027872

PXD027872 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Nuclear pore complexes interactome dissection
Description	We purified the different types of NPCs in yeast using a differential affinity purification strategy and analyzed their respective compositions and interactomes by mass spectrometry. Therefore, we compared the relative abundancies of specific nuclear factors and NPCs associated factor between all pores, basket-less pores, basket-containing pores, and pores upon MLP1/2 deletion
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_07:09:26.446.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD027872
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Marlene Oeffinger
SpeciesList	scientific name: Saccharomyces cerevisiae (Baker's yeast); NCBI TaxID: 4932;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-08-11 08:22:03	ID requested
1	2022-10-13 03:09:14	announced
⏵ 2	2023-11-14 07:09:27	announced	2023-11-14: Updated project metadata.

Publication List

Bensidoun P, Reiter T, Montpetit B, Zenklusen D, Oeffinger M, Nuclear mRNA metabolism drives selective basket assembly on a subset of nuclear pore complexes in budding yeast. Mol Cell, 82(20):3856-3871.e6(2022) [pubmed]
10.6019/PXD027872;

Bensidoun P, Reiter T, Montpetit B, Zenklusen D, Oeffinger M, Nuclear mRNA metabolism drives selective basket assembly on a subset of nuclear pore complexes in budding yeast. Mol Cell, 82(20):3856-3871.e6(2022) [pubmed]

10.6019/PXD027872;

Keyword List

submitter keyword: Nuclear pore heterogeneity , affinity purification, mRNA maturation

submitter keyword: Nuclear pore heterogeneity , affinity purification, mRNA maturation

Contact List

Marlene Oeffinger
contact affiliation	Institut de Recherches Cliniques de Montréal Department of Biochemistry, University of Montreal Department of Medicine, Division ofExperimental Medicine
contact email	marlene.oeffinger@ircm.qc.ca
lab head
Marlene Oeffinger
contact affiliation	Institut de recherches cliniques Montreal (IRCM) Universite de Montreal
contact email	marlene.oeffinger@ircm.qc.ca
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/10/PXD027872
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/10/PXD027872

PRIDE project URI

Repository Record List

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