PXD027849 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteomic profiling to predict therapeutic response to anti-PD1 therapy in advanced melanoma – Orbitrap Elite dataset depleted serum |
Description | MS-based proteomics based on data-dependent acquisition / shotgun MS was used to study the response of melanoma patients to anti-PD1 therapy. Human serum samples were collected from patients at the start of their therapy and later categorized into responders and non-responders based on clinical outcome. Samples were subjected to immunodepletion and proteins were identified by bottom-up proteomics. |
HostingRepository | PRIDE |
AnnounceDate | 2023-08-18 |
AnnouncementXML | Submission_2023-08-18_05:26:42.504.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | AlexanderLeitner |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | iodoacetamide derivatized residue |
Instrument | LTQ Orbitrap Elite |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-08-10 06:21:05 | ID requested | |
⏵ 1 | 2023-08-18 05:26:42 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Melanoma |
serum |
immunodepletion |
drug response |
therapeutic efficacy |
anti-PD1 therapy |
biomarker discovery |
Contact List
RuediAebersold |
contact affiliation | ETH Zurich, Institute of Molecular Systems Biology, Zurich, Switzerland |
contact email | aebersold@imsb.biol.ethz.ch |
lab head | |
AlexanderLeitner |
contact affiliation | ETH Zurich, Institute of Molecular Systems Biology |
contact email | leitner@imsb.biol.ethz.ch |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/08/PXD027849 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD027849
- Label: PRIDE project
- Name: Proteomic profiling to predict therapeutic response to anti-PD1 therapy in advanced melanoma – Orbitrap Elite dataset depleted serum