PXD027426

PXD027426 is an original dataset announced via ProteomeXchange.

Title	Nam Lot enamel proteome: part of a multi-proxy approach to exploring Homo sapiens arrival, environments and adaptations in Southeast Asia
Description	Here we analyse two enamel protein extractions from a single Late Pleistocene dental fragment from Nam Lot (Laos). The proteome is analyzed for potential phylogenetic information, from which we concude the specimen represents an individual belonging to the genus Pongo, and characterized in terms of its molecular damage (deamidation, peptide lengths).
HostingRepository	PRIDE
AnnounceDate	2021-11-30
AnnouncementXML	Submission_2021-11-30_14:22:10.429.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Frido Welker
SpeciesList	scientific name: Pongo sp.; NCBI TaxID: 9603;
ModificationList	methionine oxidation with neutral loss of 80 Da; L-ornithine (Arg); phosphorylated residue; monohydroxylated proline; deamidated residue
Instrument	Q Exactive HF-X

Revision	Datetime	Status	ChangeLog Entry
0	2021-07-19 22:07:15	ID requested
⏵ 1	2021-11-30 14:22:11	announced

Bacon AM, Bourgon N, Welker F, Cappellini E, Fiorillo D, Tombret O, Thi Mai Huong N, Anh Tuan N, Sayavonkhamdy T, Souksavatdy V, Sichanthongtip P, Antoine PO, Duringer P, Ponche JL, Westaway K, Joannes-Boyau R, Boesch Q, Suzzoni E, Frangeul S, Patole-Edoumba E, Zachwieja A, Shackelford L, Demeter F, Hublin JJ, Dufour É, A multi-proxy approach to exploring Homo sapiens' arrival, environments and adaptations in Southeast Asia. Sci Rep, 11(1):21080(2021) [pubmed]

submitter keyword: Enamel, palaeproteomics, LC-MS/MS, Pleistocene, human evolution

Enrico Cappellini
contact affiliation	Evolutionary Genomics Section, Globe Institute, University of Copenhagen
contact email	ecappellini@sund.ku.dk
lab head
Frido Welker
contact affiliation	Postdoc Department of Biology, University of Copenhagen
contact email	frido.welker@palaeo.eu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/11/PXD027426

PRIDE project URI

• PRIDE
  1. PXD027426
     1. Label: PRIDE project
     2. Name: Nam Lot enamel proteome: part of a multi-proxy approach to exploring Homo sapiens arrival, environments and adaptations in Southeast Asia