PXD027341

PXD027341 is an original dataset announced via ProteomeXchange.

Title	Proteomic profiling of glioblastoma tumour tissue
Description	Using HiRIEF LC-MS/MS, we analysed 10 GBM tumour tissue samples ran in one TMT10 set. The set consisted of 7 primary tumours and 3 non-matched recurrent tumours. One primary tumour was highly necrotic.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_07:27:33.570.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Haris Babačić
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2021-07-15 09:30:06	ID requested
1	2022-12-23 07:19:10	announced
⏵ 2	2023-11-14 07:27:34	announced	2023-11-14: Updated project metadata.

Baba, č, i, ć H, Galardi S, Umer HM, Hellstr, ö, m M, Uhrbom L, Maturi N, Cardinali D, Pellegatta S, Michienzi A, Trevisi G, Mangiola A, Lehti, ö J, Ciafr, è SA, Pernemalm M, Glioblastoma stem cells express non-canonical proteins and exclusive mesenchymal-like or non-mesenchymal-like protein signatures. Mol Oncol, 17(2):238-260(2023) [pubmed]

submitter keyword: tissue,glioblastoma, brain cancer, HiRIEF, LC-MS/MS

Janne Lehtiö
contact affiliation	Department of Oncology and Pathology, Science for Life Laboratory, Stockholm, Sweden
contact email	janne.lehtio@ki.se
lab head
Haris Babačić
contact affiliation	1. Department of Oncology-Pathology, Karolinska Institute, Stockholm; 2. Proteogenomics Facility, Science for Life Laboratory
contact email	haris.babacic@ki.se
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/12/PXD027341

PRIDE project URI

• PRIDE
  1. PXD027341
     1. Label: PRIDE project
     2. Name: Proteomic profiling of glioblastoma tumour tissue