PXD027317 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | comparative proteomic profile in duodenum sample of male slow-growing chicken |
Description | Since the molecular mechanism underlying feed efficiency (FE) in slow-growing chickens is poorly understood. Thus, this study aimed to investigate the proteome differences and possible pathways associated with FE in male slow-growing chicken by using a label-free quantitative proteomic approach. At 10 weeks of ages duodenum samples from six animals (three high-FE and three low-FE chickens) were collected for differential abundant proteins (DAPs), protein networks, functional enrichment and pathway analysis. In this study, we found 40 DAPs significantly associated with FE pathways included glycolysis/gluconeogenesis, peroxisome, oxidative phosphorylation, tight junction, and cysteine and methionine metabolism. Thus, the differences of protein driving those pathways affected the FE potential of slow-growing chicken might be interesting candidate biomarkers for genomic selection of animals with a higher efficient feed utilization. |
HostingRepository | PRIDE |
AnnounceDate | 2022-05-20 |
AnnouncementXML | Submission_2022-05-20_02:17:59.047.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Pramin Kaewsatuan |
SpeciesList | scientific name: Gallus gallus (Chicken); NCBI TaxID: 9031; |
ModificationList | monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-07-14 22:09:34 | ID requested | |
⏵ 1 | 2022-05-20 02:17:59 | announced | |
Publication List
Kaewsatuan P, Poompramun C, Kubota S, Yongsawatdigul J, Molee W, Uimari P, Molee A, Comparative proteomics revealed duodenal metabolic function associated with feed efficiency in slow-growing chicken. Poult Sci, 101(6):101824(2022) [pubmed] |
Keyword List
submitter keyword: Label-free LC-MSMS, feed efficiency, slow-growing chicken, duodenum |
Contact List
Amonrat molee |
contact affiliation | head of center of Excellence on Technology and iInnovation for Korat Chicken Business Development |
contact email | amonrat@sut.ac.th |
lab head | |
Pramin Kaewsatuan |
contact affiliation | animal breeding |
contact email | d5930029@g.sut.ac.th |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/05/PXD027317 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD027317
- Label: PRIDE project
- Name: comparative proteomic profile in duodenum sample of male slow-growing chicken