PXD027303 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Protein-SIP of cellulose-fed reactors |
Description | In this study we examined an anaerobic digester reactor fed with cellulose in order to identify cellulose degrading microorganisms using a culture independent approach. A metagenome was linked to the newly synthesized proteins involved by cellulose, by investigation of labelled proteins (Protein-SIP). The study aims at identifying microorganisms involved in the degradation of plant-based biomass. |
HostingRepository | PRIDE |
AnnounceDate | 2022-03-23 |
AnnouncementXML | Submission_2022-03-23_06:56:50.280.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Jan Struckmann Poulsen |
SpeciesList | scientific name: anaerobic digester metagenome; NCBI TaxID: 1263854; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-07-14 07:36:39 | ID requested | |
⏵ 1 | 2022-03-23 06:56:50 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Stable isotope probing, lignocellulosic biomass, Metaproteomics, Microbial communities, Anaerobic digestion, Stable isotope probing, lignocellulosic biomass, Metaproteomics, Microbial communities, Anaerobic digestion |
Contact List
Jeppe Lund Nielsen |
contact affiliation | Department of Chemistry and Bioscience, Aalborg University, Fredrik Bajers Vej 7H, 9220 Aalborg E, Denmark |
contact email | jln@bio.aau.dk |
lab head | |
Jan Struckmann Poulsen |
contact affiliation | Aalborg University |
contact email | jsp@bio.aau.dk |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/03/PXD027303 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD027303
- Label: PRIDE project
- Name: Protein-SIP of cellulose-fed reactors