PXD027249

PXD027249 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Metaproteomic analysis of two bacterial species
Description	The species of two bacterial colonies were determined by sequencing their DNA and comparing it with databases. Their adaptation to extreme conditions (conditions similar to those found in the planet Mars) were studied by proteomics, comparing the proteome obtained from a culture under standard laboratory conditions with the proteome obtained from a culture under extreme conditions. The techniques used were 2-DE electrophoresis, Difference in gel electrophoresis (2-D DIGE) and protein analysis by mass spectrometry Matrix Assisted Laser Desorption/ Ionization – Time of Flight (MALDI-TOF).
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_07:13:35.460.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Eva Garcia
SpeciesList	scientific name: environmental samples; NCBI TaxID: 48479;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	autoflex

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-07-12 08:17:44	ID requested
1	2023-07-17 13:20:15	announced
⏵ 2	2023-11-14 07:13:35	announced	2023-11-14: Updated project metadata.

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: MALDI-TOF MS, culturomics, 2DE, 2-DIGE, metaproteomics

submitter keyword: MALDI-TOF MS, culturomics, 2DE, 2-DIGE, metaproteomics

Contact List

Garcia Lopez Eva; Cid Sanchez Cristina
contact affiliation	Microbial Evolution Laboratory, Centro de Astrobiologia (CSIC-INTA), 28850 Torrejón de Ardoz, Madrid, Spain
contact email	garciale@cab.inta-csic.es
lab head
Eva Garcia
contact affiliation	ES (+34) 915206455
contact email	garciale@cab.inta-csic.es
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/07/PXD027249
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/07/PXD027249

PRIDE project URI

Repository Record List

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