PXD027182

PXD027182 is an original dataset announced via ProteomeXchange.

Title	Neuroblastoma HLA class I Immunopeptidomics
Description	We surveyed the immunopeptidome of neuroblastoma tumors to identify tumor-specific targets derived from non-mutated self proteins originating from core-regulatory circuit proteins.
HostingRepository	PRIDE
AnnounceDate	2021-08-11
AnnouncementXML	Submission_2021-11-30_13:56:00.611.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD027182
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Mark Yarmarkovich
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion Lumos

Revision	Datetime	Status	ChangeLog Entry
0	2021-07-08 01:33:51	ID requested
1	2021-08-11 10:43:34	announced
⏵ 2	2021-11-30 13:56:01	announced	2021-11-30: Updated publication reference for PubMed record(s): 34732890.

Yarmarkovich M, Marshall QF, Warrington JM, Premaratne R, Farrel A, Groff D, Li W, di Marco M, Runbeck E, Truong H, Toor JS, Tripathi S, Nguyen S, Shen H, Noel T, Church NL, Weiner A, Kendsersky N, Martinez D, Weisberg R, Christie M, Eisenlohr L, Bosse KR, Dimitrov DS, Stevanovic S, Sgourakis NG, Kiefel BR, Maris JM, Cross-HLA targeting of intracellular oncoproteins with peptide-centric CARs. Nature, 599(7885):477-484(2021) [pubmed]

submitter keyword: Neuroblastoma immunopeptidomics, HLA class I, tumor antigens, PHOX2B

John M. Maris
contact affiliation	Children's Hospital of Philadelphia Division of Oncology and Center for Childhood Cancer Research USA
contact email	maris@chop.edu
lab head
Mark Yarmarkovich
contact affiliation	Children's Hospital of Philadelphia
contact email	yarm@pennmedicine.upenn.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/08/PXD027182

PRIDE project URI

• PRIDE
  1. PXD027182
     1. Label: PRIDE project
     2. Name: Neuroblastoma HLA class I Immunopeptidomics