PXD027166 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | iTRAQ-based quantitative proteomic analysis of nuclear proteome in VPS35-depleted HeLa cells |
Description | Stable VPS35 knockdown HeLa cells were generated using lentiviral short hairpin RNA (shRNA) construct. Isobaric tags for relative and absolute quantitation (iTRAQ)-based mass spectrometry was used to measure the changes of nuclear protein abundance in VPS35-depleted HeLa cells. |
HostingRepository | PRIDE |
AnnounceDate | 2022-08-12 |
AnnouncementXML | Submission_2022-08-12_05:49:36.006.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Zhi-Hui Deng |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-07-07 09:24:36 | ID requested | |
⏵ 1 | 2022-08-12 05:49:36 | announced | |
Publication List
Hong X, Wang T, Du J, Hong Y, Yang CP, Xiao W, Li Y, Wang M, Sun H, Deng ZH, ITRAQ-based quantitative proteomic analysis reveals that VPS35 promotes the expression of MCM2-7 genes in HeLa cells. Sci Rep, 12(1):9700(2022) [pubmed] |
Keyword List
submitter keyword: iTRAQ |
VPS35 |
nuclear proteome |
HeLa cells |
Contact List
Zhi-Hui Deng |
contact affiliation | Qiqihar Medical University |
contact email | deng.zhihui@qmu.edu.cn |
lab head | |
Zhi-Hui Deng |
contact affiliation | Qiqihar Medical University |
contact email | deng.zhihui@qmu.edu.cn |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/08/PXD027166 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD027166
- Label: PRIDE project
- Name: iTRAQ-based quantitative proteomic analysis of nuclear proteome in VPS35-depleted HeLa cells