PXD027166

PXD027166 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	iTRAQ-based quantitative proteomic analysis of nuclear proteome in VPS35-depleted HeLa cells
Description	Stable VPS35 knockdown HeLa cells were generated using lentiviral short hairpin RNA (shRNA) construct. Isobaric tags for relative and absolute quantitation (iTRAQ)-based mass spectrometry was used to measure the changes of nuclear protein abundance in VPS35-depleted HeLa cells.
HostingRepository	PRIDE
AnnounceDate	2022-08-12
AnnouncementXML	Submission_2022-08-12_05:49:36.006.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Zhi-Hui Deng
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-07-07 09:24:36	ID requested
⏵ 1	2022-08-12 05:49:36	announced

Publication List

Hong X, Wang T, Du J, Hong Y, Yang CP, Xiao W, Li Y, Wang M, Sun H, Deng ZH, ITRAQ-based quantitative proteomic analysis reveals that VPS35 promotes the expression of MCM2-7 genes in HeLa cells. Sci Rep, 12(1):9700(2022) [pubmed]

Hong X, Wang T, Du J, Hong Y, Yang CP, Xiao W, Li Y, Wang M, Sun H, Deng ZH, ITRAQ-based quantitative proteomic analysis reveals that VPS35 promotes the expression of MCM2-7 genes in HeLa cells. Sci Rep, 12(1):9700(2022) [pubmed]

Keyword List

submitter keyword: iTRAQ
VPS35
nuclear proteome
HeLa cells

submitter keyword: iTRAQ

VPS35

nuclear proteome

HeLa cells

Contact List

Zhi-Hui Deng
contact affiliation	Qiqihar Medical University
contact email	deng.zhihui@qmu.edu.cn
lab head
Zhi-Hui Deng
contact affiliation	Qiqihar Medical University
contact email	deng.zhihui@qmu.edu.cn
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/08/PXD027166
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/08/PXD027166

PRIDE project URI

Repository Record List

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