PXD027104

PXD027104 is an original dataset announced via ProteomeXchange.

Title	Syntrophic coculture of Syntrophobacter fumaroxidans MPOBT and Geobacter sulfurreducens PCA
Description	Propionate accumulation is an important bottleneck for anaerobic degradation of organic matter. We hypothesized that propionate conversion by a novel coculture of Syntrophobacter fumaroxidans and Geobacter sulfurreducens can be an alternative strategy for propionate oxidation coupled to Fe(III) reduction. In this study, we successfully cocultured S. fumaroxidans and G. sulfurreducens on propionate and Fe(III). Proteomic analyses of this coculture provided insights into the underlying mechanisms of propionate metabolism pathway and interspecies electron transfer mechanism. Our study can be further useful in understanding syntrophic propionate degradation in bioelectrochemical and anaerobic digestion systems.
HostingRepository	PRIDE
AnnounceDate	2022-02-17
AnnouncementXML	Submission_2022-02-17_04:57:53.022.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sjef Boeren
SpeciesList	scientific name: Syntrophobacter fumaroxidans MPOB; NCBI TaxID: 335543; scientific name: Methanospirillum hungatei JF-1; NCBI TaxID: 323259; scientific name: Geobacter sulfurreducens PCA; NCBI TaxID: 243231;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2021-07-05 08:39:54	ID requested
⏵ 1	2022-02-17 04:57:53	announced

Mollaei M, Suarez-Diez M, Sedano-Nunez VT, Boeren S, Stams AJM, Plugge CM, . Front Microbiol, 12():708911(2021) [pubmed]

submitter keyword: Syntrophobacter fumaroxidans, Geobacter sulfurreducens, coculture, interspecies electron transfer, propionate, proteomics

Sjef Boeren
contact affiliation	Wageningen University
contact email	sjef.boeren@wur.nl
lab head
Sjef Boeren
contact affiliation	Biochemistry
contact email	sjef.boeren@wur.nl
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD027104

PRIDE project URI

• PRIDE
  1. PXD027104
     1. Label: PRIDE project
     2. Name: Syntrophic coculture of Syntrophobacter fumaroxidans MPOBT and Geobacter sulfurreducens PCA