PXD027097 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Genome survey sequencing of Gossypium robinsonii to investigate the molecular responses of wild cotton pollen to extreme heat |
Description | Wild species are valuable resources for developing resilient crops to environmental stresses. We used Gossypium robinsonii, Australian wild cotton, to investigate the molecular signatures contributing to the tolerance of this plant to harsh environments. Three stages of pollen development, including tetrads (TE; 5-5.5mm), uninucleate microspores (UN; 7-10mm) and binucleate microspores (BN; 13-24mm) were exposed to 36/25 °C (moderate heat) or 40/30 °C (extreme heat) for 5 days, and the corresponding mature pollen grains were collected for SWATH-MS analysis. The genome of G. robinsonii assembled in the present study was used for proteome reference. |
HostingRepository | PRIDE |
AnnounceDate | 2022-02-10 |
AnnouncementXML | Submission_2022-02-09_18:21:54.937.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Farhad Masoomi-Aladizgeh |
SpeciesList | scientific name: Gossypium robinsonii; NCBI TaxID: 3636; |
ModificationList | iodoacetamide derivatized residue |
Instrument | TripleTOF 6600 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-07-05 02:06:52 | ID requested | |
⏵ 1 | 2022-02-09 18:21:55 | announced | |
Publication List
Masoomi-Aladizgeh F, Kamath KS, Haynes PA, Atwell BJ, Genome survey sequencing of wild cotton (Gossypium robinsonii) reveals insights into proteomic responses of pollen to extreme heat. Plant Cell Environ, 45(4):1242-1256(2022) [pubmed] |
Keyword List
submitter keyword: Genome sequencing, heat stress, pollen, SWATH-MS, Wild cotton |
Contact List
Brian J Atwell |
contact affiliation | Department of Biological Sciences at Macquarie University |
contact email | brian.atwell@mq.edu.au |
lab head | |
Farhad Masoomi-Aladizgeh |
contact affiliation | Macquarie University |
contact email | farhad.masoomi-aladizgeh@hdr.mq.edu.au |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD027097 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD027097
- Label: PRIDE project
- Name: Genome survey sequencing of Gossypium robinsonii to investigate the molecular responses of wild cotton pollen to extreme heat