PXD027097

PXD027097 is an original dataset announced via ProteomeXchange.

Title	Genome survey sequencing of Gossypium robinsonii to investigate the molecular responses of wild cotton pollen to extreme heat
Description	Wild species are valuable resources for developing resilient crops to environmental stresses. We used Gossypium robinsonii, Australian wild cotton, to investigate the molecular signatures contributing to the tolerance of this plant to harsh environments. Three stages of pollen development, including tetrads (TE; 5-5.5mm), uninucleate microspores (UN; 7-10mm) and binucleate microspores (BN; 13-24mm) were exposed to 36/25 °C (moderate heat) or 40/30 °C (extreme heat) for 5 days, and the corresponding mature pollen grains were collected for SWATH-MS analysis. The genome of G. robinsonii assembled in the present study was used for proteome reference.
HostingRepository	PRIDE
AnnounceDate	2022-02-10
AnnouncementXML	Submission_2022-02-09_18:21:54.937.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Farhad Masoomi-Aladizgeh
SpeciesList	scientific name: Gossypium robinsonii; NCBI TaxID: 3636;
ModificationList	iodoacetamide derivatized residue
Instrument	TripleTOF 6600

Revision	Datetime	Status	ChangeLog Entry
0	2021-07-05 02:06:52	ID requested
⏵ 1	2022-02-09 18:21:55	announced

Masoomi-Aladizgeh F, Kamath KS, Haynes PA, Atwell BJ, Genome survey sequencing of wild cotton (Gossypium robinsonii) reveals insights into proteomic responses of pollen to extreme heat. Plant Cell Environ, 45(4):1242-1256(2022) [pubmed]

submitter keyword: Genome sequencing, heat stress, pollen, SWATH-MS, Wild cotton

Brian J Atwell
contact affiliation	Department of Biological Sciences at Macquarie University
contact email	brian.atwell@mq.edu.au
lab head
Farhad Masoomi-Aladizgeh
contact affiliation	Macquarie University
contact email	farhad.masoomi-aladizgeh@hdr.mq.edu.au
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD027097
     1. Label: PRIDE project
     2. Name: Genome survey sequencing of Gossypium robinsonii to investigate the molecular responses of wild cotton pollen to extreme heat