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PXD027097

PXD027097 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleGenome survey sequencing of Gossypium robinsonii to investigate the molecular responses of wild cotton pollen to extreme heat
DescriptionWild species are valuable resources for developing resilient crops to environmental stresses. We used Gossypium robinsonii, Australian wild cotton, to investigate the molecular signatures contributing to the tolerance of this plant to harsh environments. Three stages of pollen development, including tetrads (TE; 5-5.5mm), uninucleate microspores (UN; 7-10mm) and binucleate microspores (BN; 13-24mm) were exposed to 36/25 °C (moderate heat) or 40/30 °C (extreme heat) for 5 days, and the corresponding mature pollen grains were collected for SWATH-MS analysis. The genome of G. robinsonii assembled in the present study was used for proteome reference.
HostingRepositoryPRIDE
AnnounceDate2022-02-10
AnnouncementXMLSubmission_2022-02-09_18:21:54.937.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterFarhad Masoomi-Aladizgeh
SpeciesList scientific name: Gossypium robinsonii; NCBI TaxID: 3636;
ModificationListiodoacetamide derivatized residue
InstrumentTripleTOF 6600
Dataset History
RevisionDatetimeStatusChangeLog Entry
02021-07-05 02:06:52ID requested
12022-02-09 18:21:55announced
Publication List
Masoomi-Aladizgeh F, Kamath KS, Haynes PA, Atwell BJ, Genome survey sequencing of wild cotton (Gossypium robinsonii) reveals insights into proteomic responses of pollen to extreme heat. Plant Cell Environ, 45(4):1242-1256(2022) [pubmed]
Keyword List
submitter keyword: Genome sequencing, heat stress, pollen, SWATH-MS, Wild cotton
Contact List
Brian J Atwell
contact affiliationDepartment of Biological Sciences at Macquarie University
contact emailbrian.atwell@mq.edu.au
lab head
Farhad Masoomi-Aladizgeh
contact affiliationMacquarie University
contact emailfarhad.masoomi-aladizgeh@hdr.mq.edu.au
dataset submitter
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Dataset FTP location
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