PXD027012 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Microdissected tumor epithelium and tumor stroma from patients with breast cancer |
Description | Stratification of breast cancers into subtypes are generally based on immune assays on tumor cells and/or mRNA expression of tumor cell enriched tissues. Here, we have laser microdissected tumor epithelium and tumor stroma from 24 breast cancer biopsies (12 luminal-like and 12 basal-like). We hypothesized that the stromal proteome would separate patients with breast into groups independently of the traditional epithelial based subtypes. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_05:50:01.547.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Kenneth Finne |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | iodoacetamide derivatized residue |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-06-30 05:13:09 | ID requested | |
1 | 2023-06-23 01:08:13 | announced | |
2 | 2023-11-14 06:46:27 | announced | 2023-11-14: Updated project metadata. |
⏵ 3 | 2024-10-22 05:50:01 | announced | 2024-10-22: Updated project metadata. |
Publication List
Keyword List
submitter keyword: Human, cancer, proteomics, microdissection, breast, basal-like, luminal |
Contact List
Lars Akslen |
contact affiliation | Centre for Cancer Biomarkers (CCBIO), Department of Clinical Medicine, Faculty of Medicine, University of Bergen, Norway |
contact email | Lars.Akslen@uib.no |
lab head | |
Kenneth Finne |
contact affiliation | University of Bergen |
contact email | kenneth.finne@uib.no |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD027012
- Label: PRIDE project
- Name: Microdissected tumor epithelium and tumor stroma from patients with breast cancer