PXD026971

PXD026971 is an original dataset announced via ProteomeXchange.

Title	Proteomic analysis of Filifactor alocis type and clinically isolated strains
Description	Filifactor alocis is a Gram-positive asaccharolytic, obligate anaerobic rod of the phylum Firmicutes, strongly associated with periodontitis. In this study, we performed the whole proteomic analysis of an F. alocis type strain (ATCC 35896; CCUG 47790), as well as nine clinically isolated strains at the Clinical Oral Microbiology Laboratory, Umeå University, for identification and deeper characterization of this species. Label-free quantification was used to compare the proteomic differences between different strains.
HostingRepository	PRIDE
AnnounceDate	2022-06-09
AnnouncementXML	Submission_2022-06-09_10:19:26.606.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Kai Bao
SpeciesList	scientific name: Filifactor alocis; NCBI TaxID: 143361;
ModificationList	methionine oxidation with neutral loss of 64 Da; N-acylated residue; acetylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion

Revision	Datetime	Status	ChangeLog Entry
0	2021-06-28 05:07:42	ID requested
⏵ 1	2022-06-09 10:19:27	announced

Bao K, Claesson R, Gehrig P, Grossmann J, Oscarsson J, Belibasakis GN, Reveals Key Inter-Protein Interactions of Its RTX Toxin: FtxA. Pathogens, 11(5):(2022) [pubmed]

submitter keyword: Filifactor alocis, clinically isolated strains

Nagihan Bostanci
contact affiliation	Department of Dental Medicine, Karolinska Institutet
contact email	nagihan.bostanci@ki.se
lab head
Kai Bao
contact affiliation	postdoctoral researcher
contact email	kai.bao@ki.se
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD026971
     1. Label: PRIDE project
     2. Name: Proteomic analysis of Filifactor alocis type and clinically isolated strains