PXD026816 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Comparative Proteomic Analysis of retro-oil fluid and vitreous fluid from patients |
Description | There have been reports of unexplained visual loss following intra-ocular silicone oil (SiO) tamponade in retinal detachment patients, yet the underlying mechanism is unknown. In the present study, we identified differentially expressed proteins in the vitreous humor of four groups (each group, n=3): pars plana vitrectomy (PPV) for rhegmatogenous retinal detachment (RD group), SiO removal after successful retinal reattachment (SO group), cataract surgery after successful retinal reattachment with sterilized air tamponade (FA group), and PPV for epiretinal membrane (ERM group). DIA was combined with two-dimensional liquid chromatography-tandem mass spectrometry (LC-MS/MS) to find expression changes in the proteome of vitreous. |
HostingRepository | PRIDE |
AnnounceDate | 2022-02-17 |
AnnouncementXML | Submission_2022-02-17_04:46:22.553.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Yiyang Shu |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-06-20 22:41:21 | ID requested | |
⏵ 1 | 2022-02-17 04:46:23 | announced | |
Publication List
Shu Y, Gao M, Zhou Y, Liu H, Sun X, DIA Comparative Proteomic Analysis of Retro-oil Fluid and Vitreous Fluid From Retinal Detachment Patients. Front Mol Biosci, 8():763002(2021) [pubmed] |
Keyword List
submitter keyword: Human;vitreous;DIA |
Contact List
Haiyun Liu |
contact affiliation | 1Department of Ophthalmology, Shanghai General Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China, |
contact email | drliuhaiyun@126.com |
lab head | |
Yiyang Shu |
contact affiliation | Department of Ophthalmology, Shanghai General Hospital, Shanghai Jiao Tong University School of Medicine |
contact email | shuyiyang@sjtu.edu.cn |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD026816 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD026816
- Label: PRIDE project
- Name: Comparative Proteomic Analysis of retro-oil fluid and vitreous fluid from patients