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PXD026597

PXD026597 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleiTRAQ analyses of Fe-sufficient and Fe-deficient non-transformant and HRZ-knockdown rice roots
DescriptionWe conducted iTRAQ analyses using soluble proteins extracted from roots of non-transformant rice (NT) and previously generated HRZ-knockdown (HRZi) lines (Kobayashi et al., 2013 Nat Commun 4: 2792) cultivated under Fe-sufficient and Fe-deficient conditions. We identified and quantified 3,033 and 3,525 proteins in replicate 1 and 2, respectively, which totaled 4,884 proteins including 1,698 overlapping proteins between the two replicate experiments.
HostingRepositoryPRIDE
AnnounceDate2022-04-08
AnnouncementXMLSubmission_2022-04-07_17:56:52.146.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterTakanori Kobayashi
SpeciesList scientific name: Oryza sativa (Rice); NCBI TaxID: 4530;
ModificationListiTRAQ4plex-116 reporter+balance reagent acylated residue
InstrumentTripleTOF 5600
Dataset History
RevisionDatetimeStatusChangeLog Entry
02021-06-09 05:36:22ID requested
12022-04-07 17:56:52announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: HRZ ubiquitin ligases, iron deficiency, rice roots
Contact List
Takanori Kobayashi
contact affiliationResearch Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, 1-308 Suematsu, Nonoichi, Ishikawa 921-8836, JAPAN
contact emailabkoba@ishikawa-pu.ac.jp
lab head
Takanori Kobayashi
contact affiliationIshikawa Prefectural University
contact emailabkoba@ishikawa-pu.ac.jp
dataset submitter
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