PXD025943

PXD025943 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Temporal dynamics of protein and post-translational modification abundances in Populus leaf across a diurnal period
Description	Populus spp. are dedicated woody biomass feedstocks for advanced biofuels and bioproducts. Proper growth and fitness of poplar as a sustainable feedstock depends on timely perception and response to environmental signals (e.g., light, temperature, water). Poplar leaves, like other C3 photosynthesis plants, have evolved oscillating or circadian rhythms that play important roles in synchronizing biological processes with external cues. To characterize this phenomenon at a molecular level, we employed bottom-up proteomics using high-resolution mass spectrometry and de novo-assisted database searching to identify abundance changes in proteins and post-translational modifications in poplar leaf tissue sampled across a 12/12-hour light/dark diurnal period.
HostingRepository	MassIVE
AnnounceDate	2022-09-28
AnnouncementXML	Submission_2022-09-28_05:45:56.652.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Paul Abraham
SpeciesList	scientific name: Populus deltoides; NCBI TaxID: 3696;
ModificationList	Carbamidomethyl
Instrument	Q Exactive Plus

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-05-11 13:49:56	ID requested
⏵ 1	2022-09-28 05:45:57	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: Post-translational modifications, Proteome, Plant, Diurnal, Leaf

submitter keyword: Post-translational modifications, Proteome, Plant, Diurnal, Leaf

Contact List

Paul Abraham
contact affiliation	ORNL
contact email	abrahampe@ornl.gov
lab head
Paul Abraham
contact affiliation	ORNL
contact email	pav@ornl.gov
dataset submitter

Full Dataset Link List

MassIVE dataset URI
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MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000087404/