PXD025894

PXD025894 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Human skull base chordoma LC-MSMS
Description	The prognostic factors of skull base chordoma associated with outcomes of patients after surgical resection remain poorly defined. This project aimed to identify a novel prognostic factor for patients with skull base chordoma. Using a proteomics approach, we screened tumor biomarkersthat upregulated in the rapid-recurrence group of chordoma, narrowed down by bioinformatics analysis, and finally potential biomarker was chosen for validation by immunohistochemistry using tissue microarray.
HostingRepository	PRIDE
AnnounceDate	2021-11-03
AnnouncementXML	Submission_2021-11-03_03:15:54.382.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yutao Shen
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-05-09 07:46:32	ID requested
⏵ 1	2021-11-03 03:15:56	announced

Publication List

Shen Y, Li M, Xiong Y, Gui S, Bai J, Zhang Y, Li C, Proteomics Analysis Identified ASNS as a Novel Biomarker for Predicting Recurrence of Skull Base Chordoma. Front Oncol, 11():698497(2021) [pubmed]

Shen Y, Li M, Xiong Y, Gui S, Bai J, Zhang Y, Li C, Proteomics Analysis Identified ASNS as a Novel Biomarker for Predicting Recurrence of Skull Base Chordoma. Front Oncol, 11():698497(2021) [pubmed]

Keyword List

submitter keyword: Human, Skull base chordoma, LC-MSMS

submitter keyword: Human, Skull base chordoma, LC-MSMS

Contact List

Yazhuo Zhang
contact affiliation	Cell Biology Laboratory, Beijing Neurosurgical Institute, China
contact email	zyz2004520@yeah.net
lab head
Yutao Shen
contact affiliation	Beijing Neurosurgical Institute
contact email	hzabcsyt@163.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/11/PXD025894
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/11/PXD025894

PRIDE project URI

Repository Record List

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