PXD025882 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | A COMPREHENSIVE AND QUANTIFIABLE INSIGHT INTO THE PROTEOMES OF ARTICULAR CARTILAGE AND SUBCHONDRAL BONE |
Description | In this study, we used two workflows based on either pressure cycling technology (PCT) or ultrasonication (US) in combination with data independent acquisition (DIA) based mass spectrometry (MS) analysis to quantitatively assess the proteomes of articular cartilage and subchondral bone. |
HostingRepository | PRIDE |
AnnounceDate | 2023-11-14 |
AnnouncementXML | Submission_2023-11-14_06:48:27.236.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Louise Bundgaard |
SpeciesList | scientific name: Equus caballus (Horse); NCBI TaxID: 9796; |
ModificationList | acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-05-07 08:12:47 | ID requested | |
1 | 2022-10-12 11:43:23 | announced | |
⏵ 2 | 2023-11-14 06:48:28 | announced | 2023-11-14: Updated project metadata. |
Publication List
Bundgaard L, Å, hrman E, Malmstr, ö, m J, Auf dem Keller U, Walters M, Jacobsen S, Effective protein extraction combined with data independent acquisition analysis reveals a comprehensive and quantifiable insight into the proteomes of articular cartilage and subchondral bone. Osteoarthritis Cartilage, 30(1):137-146(2022) [pubmed] |
Keyword List
submitter keyword: osteoarthritis,Subchondral bone, cartilage, equine, spectral library |
Contact List
Louise Bundgaard |
contact affiliation | Department of Veterinary Clinical Sciences, University of Copenhagen |
contact email | lb@sund.ku.dk |
lab head | |
Louise Bundgaard |
contact affiliation | Department of Veterinary Clinical Sciences, University of Copenhagen, Denmark |
contact email | lb@sund.ku.dk |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/10/PXD025882 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD025882
- Label: PRIDE project
- Name: A COMPREHENSIVE AND QUANTIFIABLE INSIGHT INTO THE PROTEOMES OF ARTICULAR CARTILAGE AND SUBCHONDRAL BONE