PXD025665

PXD025665 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Cell adhesions link membrane scale protein dynamics to tissue scale force production during vertebrate head-to-tail axis extension
Description	In this paper, we use approaches from proteomics, cell biology, and tissue biomechanics to describe how a poorly characterized cell adhesion effector, Armadillo Repeat protein deleted in Velo-Cardio-Facial syndrome (ARVCF) catenin, controls vertebrate head-to-tail axis extension. We define the in vivo interactome of c-Cadherin (Cdh3), measuring its interaction with Arvcf. Specifically, this APMS dataset is comprised of "prey" protein interactions determined to associate with a Cdh3-GFP "bait."
HostingRepository	MassIVE
AnnounceDate	2021-04-27
AnnouncementXML	Submission_2021-04-27_12:15:27.666.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Rachael Cox
SpeciesList	scientific name: Xenopus laevis; common name: African clawed frog; NCBI TaxID: 8355;
ModificationList	Met-loss; Met-loss+Acetyl; Carbamidomethyl; Oxidation
Instrument	Orbitrap Fusion; Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-04-27 11:02:46	ID requested
⏵ 1	2021-04-27 12:15:28	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: cadherin, affinity purification (APMS), dorsal marginal zone (DMZ), protein interaction

submitter keyword: cadherin, affinity purification (APMS), dorsal marginal zone (DMZ), protein interaction

Contact List

Edward Marcotte
contact affiliation	University of Texas at Austin
contact email	edward.marcotte@gmail.com
lab head
Rachael Cox
contact affiliation	The University of Texas at Austin
contact email	rachaelcox@utexas.edu
dataset submitter

Full Dataset Link List

MassIVE dataset URI
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MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000087312/