PXD025302

PXD025302 is an original dataset announced via ProteomeXchange.

Title	Quantitative proteome analysis reveals changes of membrane proteins in Sedum plumbizincicola under cadmium stress
Description	Sedum plumbizincicola is an herbaceous species tolerant of excessive cadmium accumulation in above-ground tissues. The implications of membrane proteins, especially integrative membrane proteins such as transporters, in Cd detoxification in plants have received attention in recent years, but a comprehensive profiling of Cd-responsive membrane proteins from Cd hyperaccumulator plants is lacking. In this study, the membrane proteins of root, stem, and leaf tissues of S. plumbizincicola seedlings treated with Cd solution for 0, 1 or 3 days were analyzed by Tandem Mass Tag (TMT) labeling-based proteome quantification. Total 3353 proteins with predicted transmembrane helices were identified and quantified in at least one tissue group
HostingRepository	PRIDE
AnnounceDate	2021-12-30
AnnouncementXML	Submission_2021-12-30_14:31:19.140.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Zhiping Deng
SpeciesList	scientific name: Sedum plumbizincicola; NCBI TaxID: 1532924;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2021-04-09 05:35:33	ID requested
⏵ 1	2021-12-30 14:31:19	announced

Zhu Y, Qiu W, Li Y, Tan J, Han X, Wu L, Jiang Y, Deng Z, Wu C, Zhuo R, Quantitative proteome analysis reveals changes of membrane transport proteins in Sedum plumbizincicola under cadmium stress. Chemosphere, 287(Pt 3):132302(2022) [pubmed]

submitter keyword: membrane proteome, Sedum plumbizincicola, cadmium stress, TMT labeling

Zhiping Deng
contact affiliation	Institute of Virology and Biotechnology, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, P. R. China
contact email	zhipingdeng@126.com
lab head
Zhiping Deng
contact affiliation	Zhejiang Academy of Agricultural Sciences
contact email	zhipingdeng@126.com
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD025302
     1. Label: PRIDE project
     2. Name: Quantitative proteome analysis reveals changes of membrane proteins in Sedum plumbizincicola under cadmium stress