PXD025130

PXD025130 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomics characterization of purified SARS-CoV-2 viral particles for search of mutations.
Description	Shotgun proteomics characterization of purified SARS-CoV-2 viral particles and interpretation in error-tolerant mode.
HostingRepository	PRIDE
AnnounceDate	2024-10-07
AnnouncementXML	Submission_2024-10-07_13:38:50.688.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD025130
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Jean ARMENGAUD
SpeciesList	scientific name: Severe acute respiratory syndrome coronavirus 2; NCBI TaxID: 2697049;
ModificationList	natural, standard, encoded residue substitution; monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-03-31 11:06:45	ID requested
⏵ 1	2024-10-07 13:38:51	announced

Publication List

10.6019/PXD025130;
Gallais F, Pible O, Gaillard JC, Debroas S, Batina H, Ruat S, Sandron F, Delafoy D, Gerber Z, Olaso R, Gas F, Bellanger L, Deleuze JF, Grenga L, Armengaud J, Heterogeneity of SARS-CoV-2 virus produced in cell culture revealed by shotgun proteomics and supported by genome sequencing. Anal Bioanal Chem, 413(29):7265-7275(2021) [pubmed]
10.1007/s00216-021-03401-9;

10.6019/PXD025130;

Gallais F, Pible O, Gaillard JC, Debroas S, Batina H, Ruat S, Sandron F, Delafoy D, Gerber Z, Olaso R, Gas F, Bellanger L, Deleuze JF, Grenga L, Armengaud J, Heterogeneity of SARS-CoV-2 virus produced in cell culture revealed by shotgun proteomics and supported by genome sequencing. Anal Bioanal Chem, 413(29):7265-7275(2021) [pubmed]

10.1007/s00216-021-03401-9;

Keyword List

ProteomeXchange project tag: Covid-19
submitter keyword: mass spectrometry, virus,Proteomics, SARS-CoV-2, variants, COVID-19, mutations

ProteomeXchange project tag: Covid-19

submitter keyword: mass spectrometry, virus,Proteomics, SARS-CoV-2, variants, COVID-19, mutations

Contact List

Jean Armengaud
contact affiliation	CEA-Marcoule, ProGénoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Cèze, France
contact email	jean.armengaud@cea.fr
lab head
Jean ARMENGAUD
contact affiliation	Li2D
contact email	jean.armengaud@cea.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/05/PXD025130
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/05/PXD025130

PRIDE project URI

Repository Record List

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