PXD024845

PXD024845 is an original dataset announced via ProteomeXchange.

Title	Effects of 5 drugs on the human gut microbiome.
Description	We processed a human stool sample and cultured the processed microbiome in vitro under anaerobic condition for 48 hours using the rapidAIM assay. The microbiome was treated with either azathioprine, ciprofolxacin, diclofenac, nicatidine, paracetamol or control DMSO. Each drug was used at three different concentrations. We compared these results to those acquired using MS1-only data.
HostingRepository	PRIDE
AnnounceDate	2022-07-29
AnnouncementXML	Submission_2022-07-29_12:22:19.857.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Caitlin Simopoulos
SpeciesList	scientific name: human gut metagenome; NCBI TaxID: 408170;
ModificationList	acetylated residue; monohydroxylated residue
Instrument	Orbitrap Exploris 480

Revision	Datetime	Status	ChangeLog Entry
0	2021-03-18 23:42:35	ID requested
⏵ 1	2022-07-29 12:22:20	announced

Dataset with its publication pending

submitter keyword: metaproteomics, human gut microbiome

Daniel Figeys
contact affiliation	BMI, Faculty of Medicine, University of Ottawa
contact email	dfigeys@uottawa.ca
lab head
Caitlin Simopoulos
contact affiliation	University of Ottawa
contact email	csimopou@uottawa.ca
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/07/PXD024845

PRIDE project URI

• PRIDE
  1. PXD024845
     1. Label: PRIDE project
     2. Name: Effects of 5 drugs on the human gut microbiome.