PXD024815

PXD024815 is an original dataset announced via ProteomeXchange.

Title	MS1-only data acquisition of human gut microbiome data treated with 5 drugs at different concentrations.
Description	We tested the ability of MS1-only data to identify the effects of drugs at varying concentrations on a human gut microbiome. We processed a human stool sample and cultured the processed microbiome in vitro under anaerobic condition for 48 hours using the rapidAIM assay. The microbiome was treated with either azathioprine, ciprofolxacin, diclofenac, nicatidine, paracetamol or control DMSO. Each drug was used at three different concentrations
HostingRepository	PRIDE
AnnounceDate	2022-07-29
AnnouncementXML	Submission_2022-07-29_11:48:56.582.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Caitlin Simopoulos
SpeciesList	scientific name: human gut metagenome; NCBI TaxID: 408170;
ModificationList	acetylated residue; monohydroxylated residue
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2021-03-18 01:00:46	ID requested
⏵ 1	2022-07-29 11:48:56	announced

Dataset with its publication pending

submitter keyword: MS1-only, human gut microbiome

Daniel Figeys
contact affiliation	BMI, Faculty of Medicine, University of Ottawa
contact email	dfigeys@uottawa.ca
lab head
Caitlin Simopoulos
contact affiliation	University of Ottawa
contact email	csimopou@uottawa.ca
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD024815
     1. Label: PRIDE project
     2. Name: MS1-only data acquisition of human gut microbiome data treated with 5 drugs at different concentrations.