PXD024486

PXD024486 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Effect of starvation conditions on cultured human H4 neuroglioma cells stably expressing shLuc and shATG5
Description	An attempt to analyse a large proportion of the human proteome of cultured Human H4 neuroglioma cells during conditions simulating starvation. Comparisons were made under conditions of ATG5 knock-down and control (Luc) knock-down. Whole proteome crude extracts were prepared and comparisons made using SILAC in both 'forward' and 'reverse' label arrangements.
HostingRepository	PRIDE
AnnounceDate	2022-05-25
AnnouncementXML	Submission_2022-05-25_07:09:05.354.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Mike Tatham
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-03-02 23:48:14	ID requested
⏵ 1	2022-05-25 07:09:06	announced

Publication List

Vargas G, Cort, é, s O, Arias-Mu, ñ, oz E, Hern, á, ndez S, Cerda-Troncoso C, Hern, á, ndez L, Gonz, á, lez AE, Tatham MH, Bustamante HA, Retamal C, Cancino J, Varas-Godoy M, Hay RT, Rojas-Fern, á, ndez A, Cavieres VA, Burgos PV, Negative Modulation of Macroautophagy by Stabilized HERPUD1 is Counteracted by an Increased ER-Lysosomal Network With Impact in Drug-Induced Stress Cell Survival. Front Cell Dev Biol, 10():743287(2022) [pubmed]

Vargas G, Cort, é, s O, Arias-Mu, ñ, oz E, Hern, á, ndez S, Cerda-Troncoso C, Hern, á, ndez L, Gonz, á, lez AE, Tatham MH, Bustamante HA, Retamal C, Cancino J, Varas-Godoy M, Hay RT, Rojas-Fern, á, ndez A, Cavieres VA, Burgos PV, Negative Modulation of Macroautophagy by Stabilized HERPUD1 is Counteracted by an Increased ER-Lysosomal Network With Impact in Drug-Induced Stress Cell Survival. Front Cell Dev Biol, 10():743287(2022) [pubmed]

Keyword List

submitter keyword: Starvation, ATG5, cultured human cells,

submitter keyword: Starvation, ATG5, cultured human cells,

Contact List

Ronald T. Hay
contact affiliation	Centre for Gene Regulation and Expression, Life Sciences Research Complex, University of Dundee, Dundee, UK
contact email	r.t.hay@dundee.ac.uk
lab head
Mike Tatham
contact affiliation	University of Dundee
contact email	m.tatham@dundee.ac.uk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/04/PXD024486
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/04/PXD024486

PRIDE project URI

Repository Record List

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