⮝ Full datasets listing

PXD024328

PXD024328 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleQuantification of the translatome in wild type Arabidopsis and amiNAA10 plants
DescriptionWild type Arabidopsis Col-0 plants and mutants depleted of the catalytic subunit of the ribosome-associated N-acetyltransferase A (NatA) complex (amiNAA10) were grown on soil for six weeks under short-day conditions (8h light, light intensity: 100 µE, 21 °C/18 °C temperature (day/night), 50 % humidity). The translatome of both genotypes after 2 hours of light (10 am) was determined by feeding of the trackable Met-analogue azidohomoalanine for 4 hours to leaf disks floated on ½ Hoagland medium containing 50 µM azidohomoalanine in the light.
HostingRepositoryPRIDE
AnnounceDate2022-05-25
AnnouncementXMLSubmission_2022-05-25_09:10:50.787.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterThomas Ruppert
SpeciesList scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationListbiotinylated residue
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02021-02-23 23:09:36ID requested
12022-05-25 09:10:51announced
Publication List
Linster E, Forero Ruiz FL, Miklankova P, Ruppert T, Mueller J, Armbruster L, Gong X, Serino G, Mann M, Hell R, Wirtz M, Cotranslational N-degron masking by acetylation promotes proteome stability in plants. Nat Commun, 13(1):810(2022) [pubmed]
Keyword List
submitter keyword: Arabidopsis thaliana, N-acetyltransferase A, N-terminal protein acetylation, co-translational protein modification, translation
Contact List
Thomas Ruppert
contact affiliationCore facility for Mass Spectrometry, ZMBH, University of Heidelberg, Im Neuenheimer Feld 282, 69120 Heidelberg, Germany
contact emailt.ruppert@zmbh.uni-heidelberg.de
lab head
Thomas Ruppert
contact affiliationZMBH, Im Neuenheimer Feld 282, 69122 Heidelberg
contact emailt.ruppert@zmbh.uni-heidelberg.de
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/04/PXD024328
PRIDE project URI
Repository Record List
[ + ]