PXD024124

PXD024124 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Lung proteomic biomarkers associated with chronic obstructive pulmonary disease
Description	Identifying protein biomarkers for chronic obstructive pulmonary disease (COPD) has been challenging. Most previous studies have utilized individual proteins or pre-selected protein panels measured in blood samples. To identify COPD protein biomarkers by applying comprehensive mass spectrometry proteomics in lung tissue samples. We utilized mass spectrometry proteomic approaches to identify protein biomarkers from 152 lung tissue samples representing COPD cases and controls.
HostingRepository	PRIDE
AnnounceDate	2024-10-25
AnnouncementXML	Submission_2024-10-25_05:32:34.568.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Michael Hoopmann
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-02-11 01:15:42	ID requested
1	2021-11-10 08:25:22	announced
⏵ 2	2024-10-25 05:32:35	announced	2024-10-25: Updated project metadata.

Publication List

10.1152/ajplung.00198.2021;
Zhang YH, Hoopmann MR, Castaldi PJ, Simonsen KA, Midha MK, Cho MH, Criner GJ, Bueno R, Liu J, Moritz RL, Silverman EK, Lung proteomic biomarkers associated with chronic obstructive pulmonary disease. Am J Physiol Lung Cell Mol Physiol, 321(6):L1119-L1130(2021) [pubmed]

10.1152/ajplung.00198.2021;

Zhang YH, Hoopmann MR, Castaldi PJ, Simonsen KA, Midha MK, Cho MH, Criner GJ, Bueno R, Liu J, Moritz RL, Silverman EK, Lung proteomic biomarkers associated with chronic obstructive pulmonary disease. Am J Physiol Lung Cell Mol Physiol, 321(6):L1119-L1130(2021) [pubmed]

Keyword List

submitter keyword: Human COPD chronic obstructive pulmonary disease shotgun MS/MS

submitter keyword: Human COPD chronic obstructive pulmonary disease shotgun MS/MS

Contact List

Robert L. Mortiz
contact affiliation	Institute for Systems Biology
contact email	rmoritz@systemsbiology.org
lab head
Michael Hoopmann
contact affiliation	Institute for Systems Biology
contact email	michael.hoopmann@systemsbiology.org
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/01/PXD024124
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/01/PXD024124

PRIDE project URI

Repository Record List

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