PXD023986

PXD023986 is an original dataset announced via ProteomeXchange.

Title	Ubiquitin chain types on ubiquitinated VPS34 in the presence or absence of UBE3C in vitro LC-MSMS
Description	We identified VPS34 as the direct substrate of UBE3C E3 ligase in vivo and in vitro. Next, to analyze the ubiquitin chain on VPS34 that was assembled by UBE3C in vitro.
HostingRepository	PRIDE
AnnounceDate	2021-02-17
AnnouncementXML	Submission_2021-04-06_02:56:39.916.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yu-Hsuan Chen
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	ubiquitination signature dipeptidyl lysine
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2021-02-04 00:08:34	ID requested
1	2021-02-17 08:15:39	announced
⏵ 2	2021-04-06 02:56:40	announced	2021-04-06: Updated publication reference for PubMed record(s): 33637724.

Chen YH, Huang TY, Lin YT, Lin SY, Li WH, Hsiao HJ, Yan RL, Tang HW, Shen ZQ, Chen GC, Wu KP, Tsai TF, Chen RH, VPS34 K29/K48 branched ubiquitination governed by UBE3C and TRABID regulates autophagy, proteostasis and liver metabolism. Nat Commun, 12(1):1322(2021) [pubmed]

submitter keyword: VPS34, UBE3C, ubiquitin chain types

Yu-Hsuan Chen
contact affiliation	R602, Institute of Biological Chemistry, Academia Sinica
contact email	dobest2424@gmail.com
lab head
Yu-Hsuan Chen
contact affiliation	Institute of Biological Chemistry, Academia Sinica
contact email	dobest2424@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/02/PXD023986

PRIDE project URI

• PRIDE
  1. PXD023986
     1. Label: PRIDE project
     2. Name: Ubiquitin chain types on ubiquitinated VPS34 in the presence or absence of UBE3C in vitro LC-MSMS