PXD023784
PXD023784 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Proteome analysis of Mycobacterium fortuitum biofilm |
| Description | Biofilm formation by the environmental and clinical contaminant Mycobacterium fortuitum causes economic losses and serious threat to human health, as a consequence of its increasing contribution to nosocomial infections. There are no reports that elucidate physiological adaptations taking place during its planktonic to biofilm transition. The present study was hence carried out considering the global proteome of the mycobacterium. This is the first description of a global proteomic investigation into M. fortuitum biofilm. Scrutiny of biological functions in the two states provided insights into the phenotypic switch, and fundamental pathways associated with M. fortuitum pathobiology. |
| HostingRepository | PRIDE |
| AnnounceDate | 2024-10-22 |
| AnnouncementXML | Submission_2024-10-22_06:02:58.031.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Rahul Shrivastava |
| SpeciesList | scientific name: Mycolicibacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841; NCBI TaxID: 1214102; |
| ModificationList | Oxidation; Acetyl; Carbamidomethyl |
| Instrument | Q Exactive |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2021-01-25 01:31:19 | ID requested | |
| 1 | 2023-09-10 23:23:00 | announced | |
| 2 | 2023-10-26 01:28:53 | announced | 2023-10-26: Updated project metadata. |
| 3 | 2023-11-14 08:27:58 | announced | 2023-11-14: Updated project metadata. |
| 4 | 2023-11-14 09:15:46 | announced | 2023-11-14: Updated project metadata. |
| ⏵ 5 | 2024-10-22 06:03:00 | announced | 2024-10-22: Updated project metadata. |
Publication List
| Sharma A, Bansal S, Kumari N, Vashistt J, Shrivastava R, Comparative proteomic investigation unravels the pathobiology of Mycobacterium fortuitum biofilm. Appl Microbiol Biotechnol, 107(19):6029-6046(2023) [pubmed] |
| 10.1007/s00253-023-12705-y; |
| 10.1007/S00253-023-12705-Y; |
Keyword List
| submitter keyword: proteomics,Mycobacterium fortuitum, label-free, biofilm, pathogenesis |
Contact List
| Rahul Shrivastava | |
|---|---|
| contact affiliation | Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan - 173234 (H.P.), India |
| contact email | juit.rahul@gmail.com |
| lab head | |
| Rahul Shrivastava | |
| contact affiliation | Jaypee University of Information Technology Waknaghat, Solan - 173234 (H.P.), India |
| contact email | rahulmicro@gmail.com |
| dataset submitter | |
Full Dataset Link List
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/09/PXD023784 |
| PRIDE project URI |
Repository Record List
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