PXD023607

PXD023607 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Top-down proteomic analysis with FAIMS of Alzheimer's disease derived brain tissue
Description	Proteomic datasets collected from a single human midfrontal cortex tissue sample. Tissue was homogenized in 8 M Urea, 10 mM ABC, and 10 mM TCEP before subsequent cleanup with 100K and 3K MWCO filters. NanoLC was performed for RP separation. Three technical replicates were collected without FAIMS. Seven FAIMS compensation voltages with three technical replicates each were also collected, for a total of 21 FAIMS datasets. Raw files were collected in "full-profile" mode on a Thermo Fusion Lumos mass spectrometer. Data was searched with TopPIC v1.3 using PNNL's DMS processing pipeline.
HostingRepository	MassIVE
AnnounceDate	2021-04-15
AnnouncementXML	Submission_2021-04-15_13:40:17.596.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Matthew Monroe
SpeciesList	scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606;
ModificationList	Acetyl
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-01-14 15:26:06	ID requested
⏵ 1	2021-04-15 13:40:17	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: top-down, FAIMS, Alzheimer's, cortex

submitter keyword: top-down, FAIMS, Alzheimer's, cortex

Contact List

Vladislav A. Petyuk
contact affiliation	Pacific Northwest National Laboratory
contact email	Vladislav.Petyuk@pnnl.gov
lab head
Matthew Monroe
contact affiliation	Pacific Northwest National Laboratory
contact email	matthew.monroe@pnnl.gov
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000086696/

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000086696/