PXD023514

PXD023514 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Hemocyte proteome of the Baikal amphipod Eulimnogammarus verrucosus
Description	Hemocytes are blood cell circulating in the hemolymph and playing important role in crustacean immunity. On the one side this cells functions as phagocytes and express immune compounds in the external milieu on the other side. To find out the protein composition of hemocytes, we obtained hemocytes proteome of Baikal endemic amphipod Eulimnogammarus verrucosus for the first time. For this, a proteomic analysis of the protein extract were performed using liquid chromatography/tandem mass spectrometry (LC-MS/MS). A total of 1152 unique proteins were discovered. Hemocyanin/phenoloxidase, actin and tubulin were detected in proteome in the greatest amount. Also we discovered proteins of the C-type lectin superfamily, which are probably involved in the molecular pattern recognition during immune response.
HostingRepository	PRIDE
AnnounceDate	2024-02-09
AnnouncementXML	Submission_2024-02-09_00:14:54.598.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD023514
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Elena Zolotovskaya
SpeciesList	scientific name: Eulimnogammarus verrucosus; NCBI TaxID: 36941;
ModificationList	iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-01-11 08:10:17	ID requested
⏵ 1	2024-02-09 00:14:54	announced

Publication List

10.21638/SPBU03.2021.402;
10.6019/PXD023514;

10.21638/SPBU03.2021.402;

10.6019/PXD023514;

Keyword List

submitter keyword: Hemocyte proteome of the Baikal amphipod Eulimnogammarus verrucosus

submitter keyword: Hemocyte proteome of the Baikal amphipod Eulimnogammarus verrucosus

Contact List

Maxim Anatolyevich Timofeev
contact affiliation	Laboratory “Stress-physiology and perspective biotechnology”, Research Institute of Biology, Irkutsk State University, Russia
contact email	m.a.timofeyev@gmail.com
lab head
Elena Zolotovskaya
contact affiliation	Research institute of Biology at Irkutsk State University
contact email	zolotovskayaelenad@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/02/PXD023514
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/02/PXD023514

PRIDE project URI

Repository Record List

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