<<< Full experiment listing

PXD023512

PXD023512 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleIdentification of interacting proteins of lncRNA HIF1α-AS1
DescriptionLncRNA Hypoxia-inducible factor 1α-antisense 1 (HIF1α-AS1) is located on the antisense strand of the important Hypoxia-inducible factor 1α (HIF1α) gene, but being transcribed in antisense direction along the HIF1α promoter. Here we used the 3’end biotinylated HIF1a-AS1 RNA and a control RNA for RNA Pulldown and searched for interacting proteins in nuclear extracts of human umbilical vein endothelial cells (HUVEC).
HostingRepositoryPRIDE
AnnounceDate2022-09-23
AnnouncementXMLSubmission_2022-09-23_03:40:37.383.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterIlka Wittig
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListiodoacetamide derivatized residue
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02021-01-11 07:15:44ID requested
12022-09-23 03:40:37announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: LC-MSMS, lncRNA, interacting proteins
Contact List
Matthias Leisegang
contact affiliationInsitute for Cardiovascular Physiology, Goethe University, Frankfurt, Germany
contact emailLeisegang@vrc.uni-frankfurt.de
lab head
Ilka Wittig
contact affiliationFunctional Proteomics, Goethe University, Frankfurt am Main , Germany
contact emailwittig@med.uni-frankfurt.de
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/09/PXD023512
PRIDE project URI
Repository Record List
[ + ]