PXD023371

PXD023371 is an original dataset announced via ProteomeXchange.

Title	Amino acid analog induces stress response in marine Synechococcus
Description	In this study, we explored the use of BONCAT in Synechococcus sp. – a globally important cyanobacteria. We characterized the growth and microscopically quantified HPG uptake under a range of HPG concentrations in marine Synechococcus sp. Further, we examined changes in protein expression of Synechococcus sp. grown under normal and nitrate-stressed conditions relative to a non-HPG control.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_09:01:07.454.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Brett Lomenick
SpeciesList	scientific name: Synechococcus sp. CC9311; NCBI TaxID: 64471;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion

Revision	Datetime	Status	ChangeLog Entry
0	2021-01-04 02:24:51	ID requested
1	2021-03-31 20:22:22	announced
2	2023-11-14 08:35:28	announced	2023-11-14: Updated project metadata.
⏵ 3	2023-11-14 09:01:11	announced	2023-11-14: Updated project metadata.

Michels DE, Lomenick B, Chou TF, Sweredoski MJ, Pasulka A, . Appl Environ Microbiol, 87(15):e0020021(2021) [pubmed]

submitter keyword: BONCAT, phytoplankton,Synechococcus, NCAAs

Tsui-Fen Chou
contact affiliation	Proteome Exploration Laboratory, Beckman Institute, Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125
contact email	tfchou@caltech.edu
lab head
Brett Lomenick
contact affiliation	Caltech Proteome Exploration Lab
contact email	lomenick@caltech.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/04/PXD023371

PRIDE project URI

• PRIDE
  1. PXD023371
     1. Label: PRIDE project
     2. Name: Amino acid analog induces stress response in marine Synechococcus