PXD023239

PXD023239 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted host antiviral signaling and translation
Description	To study SARS-CoV-2 biology, we generated an atlas of 2422 human proteins vicinal to 17 SARS-CoV-2 viral proteins using proximity proteomics.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:32:20.700.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yen-Yu Yang
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive Plus

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-12-21 02:36:10	ID requested
1	2022-02-16 12:34:10	announced
⏵ 2	2024-10-22 05:32:21	announced	2024-10-22: Updated project metadata.

Publication List

Meyers JM, Ramanathan M, Shanderson RL, Beck A, Donohue L, Ferguson I, Guo MG, Rao DS, Miao W, Reynolds D, Yang X, Zhao Y, Yang YY, Blish C, Wang Y, Khavari PA, The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted antiviral signaling and host translation. PLoS Pathog, 17(10):e1009412(2021) [pubmed]
10.1371/journal.ppat.1009412;

Meyers JM, Ramanathan M, Shanderson RL, Beck A, Donohue L, Ferguson I, Guo MG, Rao DS, Miao W, Reynolds D, Yang X, Zhao Y, Yang YY, Blish C, Wang Y, Khavari PA, The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted antiviral signaling and host translation. PLoS Pathog, 17(10):e1009412(2021) [pubmed]

10.1371/journal.ppat.1009412;

Keyword List

ProteomeXchange project tag: Sars-cov-2, Covid-19
submitter keyword: Sars-cov-2, Proximity labeling, BioID

ProteomeXchange project tag: Sars-cov-2, Covid-19

submitter keyword: Sars-cov-2, Proximity labeling, BioID

Contact List

Yinsheng Wang
contact affiliation	Department of Chemistry, University of California, Riverside
contact email	yinsheng@ucr.edu
lab head
Yen-Yu Yang
contact affiliation	UC Riverside
contact email	yyang227@ucr.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD023239
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD023239

PRIDE project URI

Repository Record List

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