PXD023181

PXD023181 is an original dataset announced via ProteomeXchange.

Title	A systematic survey of the light-dependent protein quality control in a model cyanobacterium
Description	We conducted a large-scale identification of protein degradation under light or dark condition in the model cyanobacterium Synechocystis PCC 6803 (Hereafter referred as Synechocystis) using the isobaric labeling based quantitative proteomics technique. This is the first discovery about redox-regulated protein degradation in cyanobacteria. Our results provide the first comprehensive catalog of the light-dependent protein degradation events, and would act as an important resource in future study toward understanding light-regulated processes and protein quality control mechanism in cyanobacteria.
HostingRepository	PRIDE
AnnounceDate	2021-11-10
AnnouncementXML	Submission_2021-11-09_16:55:37.666.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Weiyang Chen
SpeciesList	scientific name: Synechocystis sp. PCC 6803 substr. GT-I; NCBI TaxID: 1080228;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2020-12-16 06:43:07	ID requested
⏵ 1	2021-11-09 16:55:38	announced

Chen W, Zheng L, Dong J, Ge H, Huang X, Wang G, Huang C, Wang Y, Lu D, Xu W, Wang Y, A Systematic Survey of the Light/Dark-dependent Protein Degradation Events in a Model Cyanobacterium. Mol Cell Proteomics, 20():100162(2021) [pubmed]

submitter keyword: Proteomics, Synechocystis, Protein degradation, Light-dependent, Light-independent, Redox, PQ pool

Yingchun Wang
contact affiliation	State Key Laboratory of Molecular Developmental Biology, Institute of Genetics an Developmental Biology, Chinese Academy of Sciences
contact email	ycwang@genetics.ac.cn
lab head
Weiyang Chen
contact affiliation	Institute of Genetics and Developmental Biology Chinese Academy of Sciences
contact email	wychen@genetics.ac.cn
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/11/PXD023181

PRIDE project URI

• PRIDE
  1. PXD023181
     1. Label: PRIDE project
     2. Name: A systematic survey of the light-dependent protein quality control in a model cyanobacterium