PXD023162

PXD023162 is an original dataset announced via ProteomeXchange.

Title	Large-scale identification of RNA-binding proteins
Description	We developed a method, which enables unbiased, systematic identification of RBPs. Applying this method, we identified a large number of RBPs, adding hundreds of candidate RBPs to those previously known. In addition, we plotted the first large-scale distribution profile of RBPs after inhibition of RNA synthesis by AtcD treatment.
HostingRepository	PRIDE
AnnounceDate	2021-09-09
AnnouncementXML	Submission_2021-09-09_15:12:29.388.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	tong liu
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion

Revision	Datetime	Status	ChangeLog Entry
0	2020-12-16 01:31:05	ID requested
⏵ 1	2021-09-09 15:12:30	announced

Zhang Z, Liu T, Dong H, Li J, Sun H, Qian X, Qin W, An RNA tagging approach for system-wide RNA-binding proteome profiling and dynamics investigation upon transcription inhibition. Nucleic Acids Res, 49(11):e65(2021) [pubmed]

submitter keyword: RNA-binding proteins(RBPs)

LC-MSMS

large-scale

Weijie Qin
contact affiliation	National Center for Protein Sciences Beijing, State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, Beijing 102206, China
contact email	aunp_dna@126.com
lab head
tong liu
contact affiliation	National Center for Protein Sciences Beijing
contact email	liutong19920918@163.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD023162

PRIDE project URI

• PRIDE
  1. PXD023162
     1. Label: PRIDE project
     2. Name: Large-scale identification of RNA-binding proteins