PXD023120

PXD023120 is an original dataset announced via ProteomeXchange.

Title	ProteomeTools Part V - TMT labeled non-modified non-tryptic peptides
Description	The ProteomeTools project aims to derive molecular and digital tools from the human proteome to facilitate biomedical and life science research. Here, we describe the the generation and multimodal LC-MS/MS analysis of >300,000 synthetic non-tryptic peptides labeled with tandem mass tags (TMT6plex).
HostingRepository	PRIDE
AnnounceDate	2025-02-09
AnnouncementXML	Submission_2025-02-08_23:58:16.248.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Daniel Zolg
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion Lumos

Revision	Datetime	Status	ChangeLog Entry
0	2020-12-14 05:07:52	ID requested
1	2021-04-26 09:26:06	announced
2	2023-05-14 14:56:13	announced	2023-05-14: Updated project metadata.
⏵ 3	2025-02-08 23:58:17	announced	2025-02-09: Updated project metadata.

10.1038/nmeth.4153;

Zolg DP, Wilhelm M, Schnatbaum K, Zerweck J, Knaute T, Delanghe B, Bailey DJ, Gessulat S, Ehrlich HC, Weininger M, Yu P, Schlegl J, Kramer K, Schmidt T, Kusebauch U, Deutsch EW, Aebersold R, Moritz RL, Wenschuh H, Moehring T, Aiche S, Huhmer A, Reimer U, Kuster B, Building ProteomeTools based on a complete synthetic human proteome. Nat Methods, 14(3):259-262(2017) [pubmed]

ProteomeXchange project tag: EPIC-XS, Proteometools

submitter keyword: synthetic peptide, TMT,ProteomeTools, tandem mass tag

Bernhard Kuster
contact affiliation	Technical University of Munich, Germany
contact email	kuster@tum.de
lab head
Daniel Zolg
contact affiliation	Technical University of Munich
contact email	daniel.zolg@tum.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/04/PXD023120

PRIDE project URI

• PRIDE
  1. PXD023120
     1. Label: PRIDE project
     2. Name: ProteomeTools Part V - TMT labeled non-modified non-tryptic peptides