PXD023032

PXD023032 is an original dataset announced via ProteomeXchange.

Title	The immunopeptidome of HLA-DR from PBMC
Description	Quantifiying the impact of initial cell counts on the identified HLA-DR immunopeptidome of PBMC.
HostingRepository	PRIDE
AnnounceDate	2021-08-23
AnnouncementXML	Submission_2021-08-23_06:58:24.749.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD023032
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Hesham ElAbd
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetic acid derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2020-12-09 23:33:22	ID requested
⏵ 1	2021-08-23 06:58:25	announced

ElAbd H, Degenhardt F, Koudelka T, Kamps AK, Tholey A, Bacher P, Lenz TL, Franke A, Wendorff M, Immunopeptidomics toolkit library (IPTK): a python-based modular toolbox for analyzing immunopeptidomics data. BMC Bioinformatics, 22(1):405(2021) [pubmed]

submitter keyword: Human blood, PBMC, immunopeptidome, HLA-II, HLA-DR

Prof. Dr. Andreas Tholey
contact affiliation	Institute of Experimental Medicine, Kiel University
contact email	a.tholey@iem.uni-kiel.de
lab head
Hesham ElAbd
contact affiliation	Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany
contact email	h.elabd@ikmb.uni-kiel.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/08/PXD023032

PRIDE project URI

• PRIDE
  1. PXD023032
     1. Label: PRIDE project
     2. Name: The immunopeptidome of HLA-DR from PBMC