PXD022989

PXD022989 is an original dataset announced via ProteomeXchange.

Title	Target search for self-reactive antibodies in human renal allograft rejection
Description	Self-reactive antibodies cloned from B cells infiltrating in a human renal allograft were subjected to IP-mass spectrometry using nuclear lysates of HEp-2 cells.
HostingRepository	PRIDE
AnnounceDate	2021-04-28
AnnouncementXML	Submission_2021-07-20_04:06:09.222.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD022989
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Donald Wolfgeher
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2020-12-08 02:24:56	ID requested
1	2021-04-26 22:12:12	announced
2	2021-04-27 21:54:20	announced	2021-04-28: Updated project metadata.
⏵ 3	2021-07-20 04:06:10	announced	2021-04-28: Updated project metadata. 2021-07-20: Updated publication reference for PubMed record(s): 34272370.

Asano Y, Daccache J, Jain D, Ko K, Kinloch A, Veselits M, Wolfgeher D, Chang A, Josephson M, Cunningham P, Tambur A, Khan AA, Pillai S, Chong AS, Clark MR, Innate-like self-reactive B cells infiltrate human renal allografts during transplant rejection. Nat Commun, 12(1):4372(2021) [pubmed]

submitter keyword: Keywords: renal allograft rejection, transcription, Q-Exactive, inflammation, scRNA-seq, Human, human, innate B cells, autoantibodies, LFQ, tolerance

Dr. Marcus R. Clark
contact affiliation	Section of Rheumatology and The Knapp Center for Lupus and Immunology Research, Department of Medicine, The University of Chicago, Chicago, IL, USA.
contact email	mclark@uchicago.edu
lab head
Donald Wolfgeher
contact affiliation	University of Chicago
contact email	donw@uchicago.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/04/PXD022989

PRIDE project URI

• PRIDE
  1. PXD022989
     1. Label: PRIDE project
     2. Name: Target search for self-reactive antibodies in human renal allograft rejection