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PXD022882

PXD022882 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleMetaproteome analysis of two synthetic bacterial consortia
DescriptionTwo synthetic bacterial consortia (SC) composed by bacterial strains isolated from a natural phenanthrene-degrading consortium (CON), Sphingobium sp. AM, Klebsiella aerogenes B, Pseudomonas sp. Bc-h and T, Burkholderia sp. Bk and Inquilinus limosus Inq were grown in LMM supplemented with 200 mg/L of phenanthrene (PHN) during 72 hours in triplicate.
HostingRepositoryPRIDE
AnnounceDate2021-09-09
AnnouncementXMLSubmission_2021-09-09_14:46:08.652.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterMarianela Macchi
SpeciesList scientific name: Burkholderia sp. Bk; NCBI TaxID: 1938441; scientific name: Pseudomonas sp.; NCBI TaxID: 306; scientific name: Inquilinus limosus; NCBI TaxID: 171674; scientific name: Sphingobium sp. AM; NCBI TaxID: 1176302; scientific name: Klebsiella aerogenes; NCBI TaxID: 548;
ModificationListmonohydroxylated residue; iodoacetamide derivatized residue
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-12-03 00:06:28ID requested
12021-09-09 14:46:09announced
Publication List
Macchi M, Festa S, Nieto E, Irazoqui JM, Vega-Vela NE, Junca H, Valacco MP, Amadio AF, Morelli IS, Coppotelli BM, Design and evaluation of synthetic bacterial consortia for optimized phenanthrene degradation through the integration of genomics and shotgun proteomics. Biotechnol Rep (Amst), 29():e00588(2021) [pubmed]
Keyword List
submitter keyword: Shotgun Proteomics, Synthetic Bacterial Consortia (SC), Sphingobium sp. (AM), Klebsiella aerogenes (B), Pseudomonas sp. (T), Pseudomonas sp (Bc-h), Inquilinus limosus (Inq), Burkholderia sp. (Bk)
Contact List
Bibiana Marina Coppotelli
contact affiliationCINDEFI-CONICET-UNLP
contact emailbibicoppotelli@gmail.com
lab head
Marianela Macchi
contact affiliationCINDEFI-UNLP
contact emailmariamacchi307@hotmail.com
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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