PXD022882

PXD022882 is an original dataset announced via ProteomeXchange.

Title	Metaproteome analysis of two synthetic bacterial consortia
Description	Two synthetic bacterial consortia (SC) composed by bacterial strains isolated from a natural phenanthrene-degrading consortium (CON), Sphingobium sp. AM, Klebsiella aerogenes B, Pseudomonas sp. Bc-h and T, Burkholderia sp. Bk and Inquilinus limosus Inq were grown in LMM supplemented with 200 mg/L of phenanthrene (PHN) during 72 hours in triplicate.
HostingRepository	PRIDE
AnnounceDate	2021-09-09
AnnouncementXML	Submission_2021-09-09_14:46:08.652.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Marianela Macchi
SpeciesList	scientific name: Burkholderia sp. Bk; NCBI TaxID: 1938441; scientific name: Pseudomonas sp.; NCBI TaxID: 306; scientific name: Inquilinus limosus; NCBI TaxID: 171674; scientific name: Sphingobium sp. AM; NCBI TaxID: 1176302; scientific name: Klebsiella aerogenes; NCBI TaxID: 548;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2020-12-03 00:06:28	ID requested
⏵ 1	2021-09-09 14:46:09	announced

Macchi M, Festa S, Nieto E, Irazoqui JM, Vega-Vela NE, Junca H, Valacco MP, Amadio AF, Morelli IS, Coppotelli BM, Design and evaluation of synthetic bacterial consortia for optimized phenanthrene degradation through the integration of genomics and shotgun proteomics. Biotechnol Rep (Amst), 29():e00588(2021) [pubmed]

submitter keyword: Shotgun Proteomics, Synthetic Bacterial Consortia (SC), Sphingobium sp. (AM), Klebsiella aerogenes (B), Pseudomonas sp. (T), Pseudomonas sp (Bc-h), Inquilinus limosus (Inq), Burkholderia sp. (Bk)

Bibiana Marina Coppotelli
contact affiliation	CINDEFI-CONICET-UNLP
contact email	bibicoppotelli@gmail.com
lab head
Marianela Macchi
contact affiliation	CINDEFI-UNLP
contact email	mariamacchi307@hotmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD022882

PRIDE project URI

• PRIDE
  1. PXD022882
     1. Label: PRIDE project
     2. Name: Metaproteome analysis of two synthetic bacterial consortia