PXD022800
PXD022800 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | timsTOF Pro datasets for CCS prediction |
Description | Tryptic digested E. coli dataset fractionated by SCX stagetip and applied to test the CCS prediction model. |
HostingRepository | jPOST |
AnnounceDate | 2021-09-06 |
AnnouncementXML | Submission_2022-09-18_03:38:05.380.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Chih-Hsiang Chang |
SpeciesList | scientific name: Escherichia coli; NCBI TaxID: 562; |
ModificationList | S-carboxamidomethyl-L-cysteine; alpha-amino acetylated residue; L-methionine sulfoxide; monohydroxylated tryptophan; deamidated L-asparagine; deamidated L-glutamine; unknown modification; unknown modification; unknown modification |
Instrument | timsTOF Pro |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2020-11-29 17:31:15 | ID requested | |
1 | 2021-09-06 06:12:42 | announced | |
⏵ 2 | 2022-09-18 03:38:06 | announced | 2022-09-18: Updated FTP location. |
Publication List
Chang CH, Yeung D, Spicer V, Ogata K, Krokhin O, Ishihama Y, Sequence-Specific Model for Predicting Peptide Collision Cross Section Values in Proteomic Ion Mobility Spectrometry. J Proteome Res, ():(2021) [pubmed] |
Keyword List
submitter keyword: IMS, e coli., CCS |
Contact List
Yasushi Ishihama | |
---|---|
lab head | |
Chih-Hsiang Chang | |
contact affiliation | Kumamoto university |
dataset submitter |
Full Dataset Link List
jPOST dataset URI |
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST001017/ |