PXD022683

PXD022683 is an original dataset announced via ProteomeXchange.

Title	Metaproteomic analyses of microbial community from ancient permafrost
Description	It remains challenging to study the viability and metabolic activity of microorganisms buried in ancient permafrost. We coupled aspartic acid racemization assay with metaproteomics to constraint the microbial activity of indigenous microbial community entrappped in permafrost sediment over 100 kyr ago.
HostingRepository	PRIDE
AnnounceDate	2021-09-09
AnnouncementXML	Submission_2021-09-09_13:39:36.596.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Renxing Liang
SpeciesList	scientific name: permafrost metagenome; NCBI TaxID: 1082480;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2020-11-24 01:24:22	ID requested
⏵ 1	2021-09-09 13:39:37	announced

Liang R, Li Z, Lau Vetter MCY, Vishnivetskaya TA, Zanina OG, Lloyd KG, Pfiffner SM, Rivkina EM, Wang W, Wiggins J, Miller J, Hettich RL, Onstott TC, Genomic reconstruction of fossil and living microorganisms in ancient Siberian permafrost. Microbiome, 9(1):110(2021) [pubmed]

submitter keyword: Ancient permafrost, microbial community

Tullis Onstott
contact affiliation	Department of Geosciences, Princeton University
contact email	tullis@princeton.edu
lab head
Renxing Liang
contact affiliation	Princeton University
contact email	rliang@princeton.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD022683

PRIDE project URI

• PRIDE
  1. PXD022683
     1. Label: PRIDE project
     2. Name: Metaproteomic analyses of microbial community from ancient permafrost