PXD022675

PXD022675 is an original dataset announced via ProteomeXchange.

Title	Extracellular whole cell cross-liking of B cells (JY)
Description	We performed XL-MS on the extracellular region of whole B cells (JY). The human leukocyte antigen (HLA) was the most cross-linked membrane protein where the most common interactor of and HLA was another HLA. We were able to model HLA-HLA interaction using the structural information the cross-links provide.
HostingRepository	PRIDE
AnnounceDate	2021-05-28
AnnouncementXML	Submission_2021-05-27_22:44:50.980.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Gad Armony
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	Orbitrap Fusion

Revision	Datetime	Status	ChangeLog Entry
0	2020-11-23 09:32:10	ID requested
⏵ 1	2021-05-27 22:44:51	announced

Dataset with its publication pending

submitter keyword: XL-MS, plasma membrane, human leukocyte antigen (HLA)

Wei Wu
contact affiliation	1 Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, 3584 CH Utrecht, The Netherlands 2 Netherlands Proteomics Center, Padualaan 8, 3584 CH Utrecht, The Netherlands
contact email	W.Wu1@uu.nl
lab head
Gad Armony
contact affiliation	Utrecht University
contact email	gadi.armony@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/05/PXD022675

PRIDE project URI

• PRIDE
  1. PXD022675
     1. Label: PRIDE project
     2. Name: Extracellular whole cell cross-liking of B cells (JY)