PXD022191

PXD022191 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Spectral library for SARS-COVID proteome and immunopeptidome
Description	This project will provide spectra information for COVID-19 proteome and immunopeptidome
HostingRepository	PRIDE
AnnounceDate	2021-04-07
AnnouncementXML	Submission_2021-04-06_22:36:43.552.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD022191
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Pouya Faridi
SpeciesList	scientific name: synthetic construct (code 12); NCBI TaxID: 2005482;
ModificationList	cysteinylation (disulfide with free L-cysteine); monohydroxylated residue; deamidated residue
Instrument	Orbitrap Fusion; TripleTOF 6600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-10-26 07:53:48	ID requested
1	2021-04-06 19:16:12	announced
⏵ 2	2021-04-06 22:36:44	announced	2021-04-07: Updated project metadata.

Publication List

10.1002/PMIC.202100036;
Li C, Revote J, Ramarathinam SH, Chung SZ, Croft NP, Scull KE, Huang Z, Ayala R, Braun A, Mifsud NA, Illing PT, Faridi P, Purcell AW, Resourcing, annotating, and analysing synthetic peptides of SARS-CoV-2 for immunopeptidomics and other immunological studies. Proteomics, 21(17-18):e2100036(2021) [pubmed]

10.1002/PMIC.202100036;

Li C, Revote J, Ramarathinam SH, Chung SZ, Croft NP, Scull KE, Huang Z, Ayala R, Braun A, Mifsud NA, Illing PT, Faridi P, Purcell AW, Resourcing, annotating, and analysing synthetic peptides of SARS-CoV-2 for immunopeptidomics and other immunological studies. Proteomics, 21(17-18):e2100036(2021) [pubmed]

Keyword List

ProteomeXchange project tag: Covid-19
submitter keyword: immunopeptidomics, SWATH-MS,HLA, SARS-COVID

ProteomeXchange project tag: Covid-19

submitter keyword: immunopeptidomics, SWATH-MS,HLA, SARS-COVID

Contact List

Anthony Purcell
contact affiliation	Deputy Head (Research), Department of Biochemistry and Molecular Biology Head Immunoproteomics Laboratory Infection and Immunity Program Monash Biomedicine Discovery Institute Monash University, Clayton Campus Clayton 3800 Victoria Australia
contact email	anthony.purcell@monash.edu
lab head
Pouya Faridi
contact affiliation	Monash University
contact email	pouya.faridi@monash.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/04/PXD022191
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/04/PXD022191

PRIDE project URI

Repository Record List

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