PXD022115

PXD022115 is an original dataset announced via ProteomeXchange.

Title	Thermal proteome profiling of temporal dynamics of infection of SARS-CoV-2
Description	We performed two dimensional thermal proteome profiling (2D-TPP) to profile the infection dynamics of SARS-CoV-2 infection in Caco-2 cells.
HostingRepository	PRIDE
AnnounceDate	2020-11-23
AnnouncementXML	Submission_2021-02-28_22:07:56.147.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Andre Mateus
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; acetylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2020-10-21 04:52:03	ID requested
1	2020-11-23 08:04:10	announced
⏵ 2	2021-02-28 22:07:56	announced	2021-03-01: Updated publication reference for PubMed record(s): 33590968.

Selkrig J, Stanifer M, Mateus A, Mitosch K, Barrio-Hernandez I, Rettel M, Kim H, Voogdt CGP, Walch P, Kee C, Kurzawa N, Stein F, Potel C, Jarzab A, Kuster B, Bartenschlager R, Boulant S, Beltrao P, Typas A, Savitski MM, SARS-CoV-2 infection remodels the host protein thermal stability landscape. Mol Syst Biol, 17(2):e10188(2021) [pubmed]

ProteomeXchange project tag: Covid-19

submitter keyword: thermal proteome profiling, SARS-CoV-2, virus, infection, coronavirus

Mikhail M. Savitski
contact affiliation	European Molecular Biology Laboratory
contact email	mikhail.savitski@embl.de
lab head
Andre Mateus
contact affiliation	European Molecular Biology Laboratory
contact email	andre.mateus@embl.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/11/PXD022115

PRIDE project URI

• PRIDE
  1. PXD022115
     1. Label: PRIDE project
     2. Name: Thermal proteome profiling of temporal dynamics of infection of SARS-CoV-2