PXD022099

PXD022099 is an original dataset announced via ProteomeXchange.

Title	C57BL/6J mice B and T cell LC-MSMS study
Description	Proteome isolated from C57BL/6J mouse B and T cells are evluated for the presence of novel open reading frame products (nORFs). Translation products encoded by non canonical or novel open reading frame (ORF) genomic regions are generally considered too small to play any significant biological role, and dismissed as inconsequential. We conduct a systematic study of novel ORFs to gain new insights into normal biological and disease processes.
HostingRepository	PRIDE
AnnounceDate	2021-09-09
AnnouncementXML	Submission_2021-09-09_10:38:11.452.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Chaitanya Erady
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	phosphorylated residue; monohydroxylated residue; iodoacetamide derivatized residue; deamidated residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2020-10-20 08:50:54	ID requested
⏵ 1	2021-09-09 10:38:12	announced

Erady C, Boxall A, Puntambekar S, Suhas Jagannathan N, Chauhan R, Chong D, Meena N, Kulkarni A, Kasabe B, Prathivadi Bhayankaram K, Umrania Y, Andreani A, Nel J, Wayland MT, Pina C, Lilley KS, Prabakaran S, Pan-cancer analysis of transcripts encoding novel open-reading frames (nORFs) and their potential biological functions. NPJ Genom Med, 6(1):4(2021) [pubmed]

submitter keyword: Mouse, B cells, T cells, spleen, LC-MSMS

Dr. Sudhakaran Prabakaran
contact affiliation	Prabakaran lab, Department of Genetics, University of Cambridge, United Kingdom
contact email	sp339@cam.ac.uk
lab head
Chaitanya Erady
contact affiliation	University of Cambridge
contact email	ce364@cam.ac.uk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD022099

PRIDE project URI

• PRIDE
  1. PXD022099
     1. Label: PRIDE project
     2. Name: C57BL/6J mice B and T cell LC-MSMS study