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PXD022099

PXD022099 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleC57BL/6J mice B and T cell LC-MSMS study
DescriptionProteome isolated from C57BL/6J mouse B and T cells are evluated for the presence of novel open reading frame products (nORFs). Translation products encoded by non canonical or novel open reading frame (ORF) genomic regions are generally considered too small to play any significant biological role, and dismissed as inconsequential. We conduct a systematic study of novel ORFs to gain new insights into normal biological and disease processes.
HostingRepositoryPRIDE
AnnounceDate2021-09-09
AnnouncementXMLSubmission_2021-09-09_10:38:11.452.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterChaitanya Erady
SpeciesList scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationListphosphorylated residue; monohydroxylated residue; iodoacetamide derivatized residue; deamidated residue
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-10-20 08:50:54ID requested
12021-09-09 10:38:12announced
Publication List
Erady C, Boxall A, Puntambekar S, Suhas Jagannathan N, Chauhan R, Chong D, Meena N, Kulkarni A, Kasabe B, Prathivadi Bhayankaram K, Umrania Y, Andreani A, Nel J, Wayland MT, Pina C, Lilley KS, Prabakaran S, Pan-cancer analysis of transcripts encoding novel open-reading frames (nORFs) and their potential biological functions. NPJ Genom Med, 6(1):4(2021) [pubmed]
Keyword List
submitter keyword: Mouse, B cells, T cells, spleen, LC-MSMS
Contact List
Dr. Sudhakaran Prabakaran
contact affiliationPrabakaran lab, Department of Genetics, University of Cambridge, United Kingdom
contact emailsp339@cam.ac.uk
lab head
Chaitanya Erady
contact affiliationUniversity of Cambridge
contact emailce364@cam.ac.uk
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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