PXD022099 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | C57BL/6J mice B and T cell LC-MSMS study |
Description | Proteome isolated from C57BL/6J mouse B and T cells are evluated for the presence of novel open reading frame products (nORFs). Translation products encoded by non canonical or novel open reading frame (ORF) genomic regions are generally considered too small to play any significant biological role, and dismissed as inconsequential. We conduct a systematic study of novel ORFs to gain new insights into normal biological and disease processes. |
HostingRepository | PRIDE |
AnnounceDate | 2021-09-09 |
AnnouncementXML | Submission_2021-09-09_10:38:11.452.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Chaitanya Erady |
SpeciesList | scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; |
ModificationList | phosphorylated residue; monohydroxylated residue; iodoacetamide derivatized residue; deamidated residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-10-20 08:50:54 | ID requested | |
⏵ 1 | 2021-09-09 10:38:12 | announced | |
Publication List
Erady C, Boxall A, Puntambekar S, Suhas Jagannathan N, Chauhan R, Chong D, Meena N, Kulkarni A, Kasabe B, Prathivadi Bhayankaram K, Umrania Y, Andreani A, Nel J, Wayland MT, Pina C, Lilley KS, Prabakaran S, Pan-cancer analysis of transcripts encoding novel open-reading frames (nORFs) and their potential biological functions. NPJ Genom Med, 6(1):4(2021) [pubmed] |
Keyword List
submitter keyword: Mouse, B cells, T cells, spleen, LC-MSMS |
Contact List
Dr. Sudhakaran Prabakaran |
contact affiliation | Prabakaran lab, Department of Genetics, University of Cambridge, United Kingdom |
contact email | sp339@cam.ac.uk |
lab head | |
Chaitanya Erady |
contact affiliation | University of Cambridge |
contact email | ce364@cam.ac.uk |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD022099 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD022099
- Label: PRIDE project
- Name: C57BL/6J mice B and T cell LC-MSMS study