PXD021974

PXD021974 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomics of Human Milk: Definition of a Discovery Workflow for Clinical Research Studies
Description	Proteins in milk have been studied for decades and proteomics, peptidomics, and glycoproteomics are the main approaches previously deployed to decipher the proteome of human milk. In the present work, we aimed at implementing a highly automated pipeline for the proteomic analysis of human milk with liquid chromatography (LC) mass spectrometry (MS). Commercial human milk samples were used to evaluate and optimize workflows.
HostingRepository	PRIDE
AnnounceDate	2024-10-07
AnnouncementXML	Submission_2024-10-07_10:46:38.067.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD021974
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Loïc Dayon
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-10-14 01:55:13	ID requested
⏵ 1	2024-10-07 10:46:38	announced

Publication List

10.6019/PXD021974;
10.1021/acs.jproteome.0c00816;
Dayon L, Macron C, Lahrichi S, N, ú, ñ, ez Galindo A, Affolter M, Proteomics of Human Milk: Definition of a Discovery Workflow for Clinical Research Studies. J Proteome Res, 20(5):2283-2290(2021) [pubmed]

10.6019/PXD021974;

10.1021/acs.jproteome.0c00816;

Dayon L, Macron C, Lahrichi S, N, ú, ñ, ez Galindo A, Affolter M, Proteomics of Human Milk: Definition of a Discovery Workflow for Clinical Research Studies. J Proteome Res, 20(5):2283-2290(2021) [pubmed]

Keyword List

submitter keyword: Human, Shotgun, Milk, Proteomics, LC-MS/MS

submitter keyword: Human, Shotgun, Milk, Proteomics, LC-MS/MS

Contact List

Loïc Dayon
contact affiliation	Nestlé Research – Nestlé Institute of Food Safety & Analytical Sciences
contact email	loic.dayon@rd.nestle.com
lab head
Loïc Dayon
contact affiliation	Nestlé Research – Nestlé Institute of Food Safety & Analytical Sciences
contact email	loic.dayon@rd.nestle.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/08/PXD021974
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/08/PXD021974

PRIDE project URI

Repository Record List

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