PXD021973

PXD021973 is an original dataset announced via ProteomeXchange.

Title	Xylem sap shotgun proteomics from Mn-excess tomato plants
Description	The aim of this work was to study the effects of Mn excess on the protein profile of the xylem sap of tomato (Solanum lycopersicum), with the aim of elucidating plant response mechanisms to these nutritional stresses. Tomato was chosen as a model plant because the tomato genome has been published and this plant species has adequate root pressure and turgid stems that permit xylem sap sampling in sufficient amounts by de-topping. The high- throughput shotgun analysis has permitted to identify and quantitate a large number of low abundance proteins in the tomato xylem sap.
HostingRepository	PRIDE
AnnounceDate	2020-12-10
AnnouncementXML	Submission_2020-12-10_01:21:59.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Laura Ceballos-Laita
SpeciesList	scientific name: Solanum lycopersicum; NCBI TaxID: 4081;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap XL

Revision	Datetime	Status	ChangeLog Entry
0	2020-10-14 01:54:44	ID requested
⏵ 1	2020-12-10 01:22:00	announced

Ceballos-Laita L, Gutierrez-Carbonell E, Takahashi D, Lonsdale A, Abad, í, a A, Doblin MS, Bacic A, Uemura M, Abad, í, a J, L, ó, pez-Mill, á, n AF, ) as Revealed by Shotgun Proteomic Analysis. Int J Mol Sci, 21(22):(2020) [pubmed]

submitter keyword: xylem sap, Mn excess, tomato, proteome, shotgun proteomics

Javier Abadia
contact affiliation	Plant Stress Physiology Group Plant Nutrition Department Aula Dei Experimental Station-CSIC, P.O. 13034 50080 Zaragoza Spain
contact email	jabadia@eead.csic.es
lab head
Laura Ceballos-Laita
contact affiliation	Experimental Station Aula Dei-CSIC
contact email	lceballos@eead.csic.es
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/12/PXD021973

PRIDE project URI

• PRIDE
  1. PXD021973
     1. Label: PRIDE project
     2. Name: Xylem sap shotgun proteomics from Mn-excess tomato plants