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PXD021827

PXD021827 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleImpact of KsgA/Dim1 on proteostasis in Haloferax volcanii and Escherichia coli
DescriptionShotgun label-free analysis of Haloferax volcanii wildtype cells in comparison to strains deleted and catalytically impaired of the almost universally conserved ribosomal RNA dimethyltransferase KsgA/Dim1and of Escherichia coli wildtype strain in comparison to KsgA/Dim1 deleted strain.
HostingRepositoryPRIDE
AnnounceDate2021-01-25
AnnouncementXMLSubmission_2021-01-24_22:56:30.xml
DigitalObjectIdentifierhttps://dx.doi.org/10.6019/PXD021827
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterMarlene Oeffinger
SpeciesList scientific name: Escherichia coli; NCBI TaxID: 562; scientific name: Haloferax volcanii; NCBI TaxID: 2246;
ModificationListmonoacetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
InstrumentOrbitrap Fusion
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-10-05 03:51:22ID requested
12021-01-24 22:56:31announced
Publication List
Kn, ü, ppel R, Trahan C, Kern M, Wagner A, Gr, ü, nberger F, Hausner W, Quax TEF, Albers SV, Oeffinger M, Ferreira-Cerca S, Insights into synthesis and function of KsgA/Dim1-dependent rRNA modifications in archaea. Nucleic Acids Res, 49(3):1662-1687(2021) [pubmed]
Keyword List
submitter keyword: KsgA, Dim1, dimethyltransferase, m6A, ribosome, archaea, Haloferax volcanii, Escherichia coli.
Contact List
Marlene Heloise Oeffinger
contact affiliationAssociate Research Professor, Institut de recherches cliniques de Montréal (IRCM) Professeure agrégée, Département de biochimie et médecine moléculaire, Université de Montréal Associate Professor, Division of Experimental Medicine, McGill University
contact emailmarlene.oeffinger@ircm.qc.ca
lab head
Marlene Oeffinger
contact affiliationInstitut de recherches cliniques Montreal (IRCM) Universite de Montreal
contact emailmarlene.oeffinger@ircm.qc.ca
dataset submitter
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Dataset FTP location
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PRIDE project URI
Repository Record List
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