PXD021816

PXD021816 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomics of unsequenced Hyphomicrobium sp. MC8b strain explored by pan-proteomics
Description	This project is a proteomic comparison of Hyphomicrobium sp. MC8b grown with dichloromethane or with methanol. The datasets were obtained using a pan-proteomic database built by merging the predicted proteomes from the annotated genomes of 13 Hyphomicrobium strains.
HostingRepository	PRIDE
AnnounceDate	2021-09-09
AnnouncementXML	Submission_2021-09-09_08:08:33.388.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD021816
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Jean ARMENGAUD
SpeciesList	scientific name: Hyphomicrobium sp. MC8b; NCBI TaxID: 300273;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-10-05 03:50:17	ID requested
⏵ 1	2021-09-09 08:08:34	announced

Publication List

Hayoun K, Geersens E, Laczny CC, Halder R, L, á, zaro S, á, nchez C, Manna A, Bringel F, Ryckelynck M, Wilmes P, Muller EEL, Alpha-Bazin B, Armengaud J, Vuilleumier S, sp. MC8b Rapidly Explored by Pan-Proteomics. Microorganisms, 8(12):(2020) [pubmed]

Hayoun K, Geersens E, Laczny CC, Halder R, L, á, zaro S, á, nchez C, Manna A, Bringel F, Ryckelynck M, Wilmes P, Muller EEL, Alpha-Bazin B, Armengaud J, Vuilleumier S, sp. MC8b Rapidly Explored by Pan-Proteomics. Microorganisms, 8(12):(2020) [pubmed]

Keyword List

submitter keyword: shotgun proteomics, Hyphomicrobium, pan-proteomics, differential proteomics

submitter keyword: shotgun proteomics, Hyphomicrobium, pan-proteomics, differential proteomics

Contact List

Jean Armengaud
contact affiliation	CEA-Marcoule, ProGénoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Cèze, France
contact email	jean.armengaud@cea.fr
lab head
Jean ARMENGAUD
contact affiliation	Li2D
contact email	jean.armengaud@cea.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD021816
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD021816

PRIDE project URI

Repository Record List

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