PXD021302

PXD021302 is an original dataset announced via ProteomeXchange.

Title	Egg proteome in vtg1 and vtg3 knocked-out zebrafish females
Description	CRISPR/Cas9 knock-out of the vtg1 and vtg3 genes was performed in zebrafish separately. This project involves proteomics screening for validation of the absence of targeted proteins in vtg1 and vtg3 and their variants in knocked out female zebrafish in eggs and investigating possible changes within the corresponding proteomes as a results of the absence of these specific vitellogenins and their variants.
HostingRepository	PRIDE
AnnounceDate	2021-09-09
AnnouncementXML	Submission_2021-09-09_09:42:37.703.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD021302
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	E Com
SpeciesList	scientific name: Danio rerio (Zebrafish) (Brachydanio rerio); NCBI TaxID: 7955;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2020-09-04 02:49:46	ID requested
⏵ 1	2021-09-09 09:42:39	announced

Yilmaz O, Patinote A, Com E, Pineau C, Bobe J, Knock out of specific maternal vitellogenins in zebrafish (Danio rerio) evokes vital changes in egg proteomic profiles that resemble the phenotype of poor quality eggs. BMC Genomics, 22(1):308(2021) [pubmed]

submitter keyword: Vitellogenins, knock-out, eggs, zebrafish

Charles Pineau
contact affiliation	Protim, Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en santé, environnement et travail) - UMR_S 1085, Rennes, France
contact email	charles.pineau@inserm.fr
lab head
E Com
contact affiliation	Protim, Irset, Inserm U1085
contact email	emmanuelle.com@univ-rennes1.fr
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD021302

PRIDE project URI

• PRIDE
  1. PXD021302
     1. Label: PRIDE project
     2. Name: Egg proteome in vtg1 and vtg3 knocked-out zebrafish females