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PXD021302

PXD021302 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleEgg proteome in vtg1 and vtg3 knocked-out zebrafish females
DescriptionCRISPR/Cas9 knock-out of the vtg1 and vtg3 genes was performed in zebrafish separately. This project involves proteomics screening for validation of the absence of targeted proteins in vtg1 and vtg3 and their variants in knocked out female zebrafish in eggs and investigating possible changes within the corresponding proteomes as a results of the absence of these specific vitellogenins and their variants.
HostingRepositoryPRIDE
AnnounceDate2021-09-09
AnnouncementXMLSubmission_2021-09-09_09:42:37.703.xml
DigitalObjectIdentifierhttps://dx.doi.org/10.6019/PXD021302
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterE Com
SpeciesList scientific name: Danio rerio (Zebrafish) (Brachydanio rerio); NCBI TaxID: 7955;
ModificationListmonohydroxylated residue; iodoacetamide derivatized residue
InstrumentLTQ Orbitrap
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-09-04 02:49:46ID requested
12021-09-09 09:42:39announced
Publication List
Yilmaz O, Patinote A, Com E, Pineau C, Bobe J, Knock out of specific maternal vitellogenins in zebrafish (Danio rerio) evokes vital changes in egg proteomic profiles that resemble the phenotype of poor quality eggs. BMC Genomics, 22(1):308(2021) [pubmed]
Keyword List
submitter keyword: Vitellogenins, knock-out, eggs, zebrafish
Contact List
Charles Pineau
contact affiliationProtim, Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en santé, environnement et travail) - UMR_S 1085, Rennes, France
contact emailcharles.pineau@inserm.fr
lab head
E Com
contact affiliationProtim, Irset, Inserm U1085
contact emailemmanuelle.com@univ-rennes1.fr
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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