PXD021302 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Egg proteome in vtg1 and vtg3 knocked-out zebrafish females |
Description | CRISPR/Cas9 knock-out of the vtg1 and vtg3 genes was performed in zebrafish separately. This project involves proteomics screening for validation of the absence of targeted proteins in vtg1 and vtg3 and their variants in knocked out female zebrafish in eggs and investigating possible changes within the corresponding proteomes as a results of the absence of these specific vitellogenins and their variants. |
HostingRepository | PRIDE |
AnnounceDate | 2021-09-09 |
AnnouncementXML | Submission_2021-09-09_09:42:37.703.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD021302 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | E Com |
SpeciesList | scientific name: Danio rerio (Zebrafish) (Brachydanio rerio); NCBI TaxID: 7955; |
ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | LTQ Orbitrap |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-09-04 02:49:46 | ID requested | |
⏵ 1 | 2021-09-09 09:42:39 | announced | |
Publication List
Yilmaz O, Patinote A, Com E, Pineau C, Bobe J, Knock out of specific maternal vitellogenins in zebrafish (Danio rerio) evokes vital changes in egg proteomic profiles that resemble the phenotype of poor quality eggs. BMC Genomics, 22(1):308(2021) [pubmed] |
Keyword List
submitter keyword: Vitellogenins, knock-out, eggs, zebrafish |
Contact List
Charles Pineau |
contact affiliation | Protim, Univ Rennes, Inserm, EHESP, Irset (Institut de recherche en santé, environnement et travail) - UMR_S 1085, Rennes, France |
contact email | charles.pineau@inserm.fr |
lab head | |
E Com |
contact affiliation | Protim, Irset, Inserm U1085 |
contact email | emmanuelle.com@univ-rennes1.fr |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD021302 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD021302
- Label: PRIDE project
- Name: Egg proteome in vtg1 and vtg3 knocked-out zebrafish females